Prosopis cineraria: 129305626
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Entry
129305626 CDS
T09047
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00040
Pentose and glucuronate interconversions
pcin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129305626
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129305626
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
129305626
NCBI-ProteinID:
XP_054801586
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
LRSTTPHHRPIYTLLRLTFRSQSQLLLSRPLHRRNALLPYSHVDSTLRALAARAEGFGGC
AIGGLHGPLYHVTTLADDGPGSLRDGCRRKEPLWIVFEVSGTIHLSSYLNVSSYKTIDGR
GQRIKLTGKGLRLKECEHVIICNLELEGGRGPDVDGIQIKPNSKHIWIDRCSLRDFDDGL
IDITRESTDITISRCHFSQHDKTMLIGADPSHTGDRCIRVTIHHCFFDGTRQRHPRVRFA
KVHLYNNYTRNWGIYAVCASVESQIFSQCNIYEAGQKKVAFKYLSEKAGDKEAAASGHIW
SEGDLFISGTQAGLMTETKSVGATAFHPSQHYTTWTVSPPTEDLKQLLHHCTGWQCVARP
PDQPAPGC
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ctccgatcaactaccccacaccaccgtcctatatatacgctgctccgcctcaccttccga
tcccaatctcagctcctcctctcacggccacttcatcgccggaatgctctcttaccttat
tcccatgtcgactccactttgcgtgctctcgccgcccgagctgaaggctttggtggctgt
gccattggtgggcttcatggtcccctttatcacgtcacgaccttagcagatgatgggcca
ggatcacttcgtgatggttgtcgcagaaaagaaccattgtggattgtatttgaggtttcc
ggaactattcatctttcatcttacctgaatgtgtcatcttacaagactattgatggccga
ggtcaaaggattaaactcactggaaagggtttgcggctgaaggaatgtgaacatgtaata
atttgcaacttagagttagaaggtggtagaggacctgatgtagatggcattcagatcaag
cctaattcaaagcacatatggatagatcgttgtagcctccgtgattttgatgatggcttg
atagatattacacgagaaagcacagatattactatttctaggtgtcatttttctcagcat
gacaaaacgatgcttattggcgcagatccctcacatactggtgatagatgcataagggtg
accattcaccattgtttctttgatgggacacgacagcggcatcctcgtgtaagatttgca
aaagtacacctgtacaacaattacaccagaaattggggcatatatgctgtttgtgcaagc
gtggagtcacagatattctcacagtgcaacatctatgaagcagggcagaagaaagtagca
tttaagtatctttctgaaaaggcaggagacaaggaagcagcagcgagtggtcacatatgg
tctgaaggagacttgttcataagtggaactcaggcaggcttgatgactgagacgaagagc
gtgggagctaccgcatttcatcccagtcagcactatacaacatggacagtgtcacctcct
acagaggatctcaaacagcttcttcatcactgcactggatggcagtgtgtagcgcggcca
ccagatcagcccgcccctggctgctga
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