Prosopis cineraria: 129305700
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Entry
129305700 CDS
T09047
Name
(RefSeq) uncharacterized protein LOC129305700 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129305700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129305700
03041 Spliceosome [BR:
pcin03041
]
129305700
03036 Chromosome and associated proteins [BR:
pcin03036
]
129305700
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129305700
Spliceosome [BR:
pcin03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
129305700
Complex B
129305700
Complex C
U2 SnRNP specific factors
129305700
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
129305700
TFTC complex
129305700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
129305700
NCBI-ProteinID:
XP_054801663
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MAVSEEECSSAKCGPSSSSSSTAHYLAKCVLRGSVVLQVLYGHIRSPSSRDVVFGKETSL
ELVIIGEDGVVQSICDQPVFGTIKDLAMLPWNGNFHAWDPKMWGKDLLVVISDSGKLTLL
TFCNEMHRFFPVTHVQLSNAGSTRHIPGRMLAVDTSGCFFAVSAYEDQLALFSMSMSKSS
DIIDERITYSAESEGAANSHRSIQRRSINGTIWSMCFISQDSRQLNKEHNPVLAILLNRR
GESLNELLLLEWNIKARAVYVISQFVEAGPLAHDIVEVPNYHGLAFLFRAGDILLMDLRD
ACNPLCVYRTSLNFLSSAVEDQTFVDDSCKLQDVDDEHFNAAACASLVLSDFDPMCIDSD
SGCSNSCYKYICSWSWEPENNKDSKMIFCLDSGEFFMIEICFDSDDLKVNLSECLYKGLA
CKELLWVVGGYLAALVEMGDGMVLKFKDGRLCYSCPVQNIAPILDMVVVDHHDEKHDQMF
ACCGVAPEGSLRLIRSGICVEQLLRTAPIYQGVTGTWTLNMKAIDSYHSFLVLSFVEETR
ILSVGLSFTDVTDSVGFEPNVCTLSCGLVSDGVLVQIHQCAVRLCLPTKTAHYEGIPMPS
PICTSWSPGNVNINLGAVGHNFVVVSTSNPCFLLILGVRLVSAYHYEIYEMQHLELQNEL
SCISIPRQKFEQKQSDLSISTHSNFTASFPSGDIGNYFVIGTHRPSVEILSFTHDRGVTI
IACGTISYTSTMGTAISGCIPQDVRLVCVDRFYVLAGLRNGMLLRFQWPSDRPASPLLNM
DAALFNINLVHSEENISNKEEDFPATLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRP
WLLHSARHSLSYTSISFQPSTHVTPVFSAECPKGMLFVANNCLHLVEMVHSKRLNVHKFH
LEGTPRKVLYHNESRILIVLRTELNCDTCLSDICCVDPLSGSILSSYKLELGEIGKSMEL
VKVGGDQVLVVGTSLSSGPAIMPNGEAESTSGRLLVLCLEHVQNSDSGSMILCSKAGSLS
QRTSPFCEIVGSAPEQLSSSSLGSSPDDNSSDGVKYDENDVWQLRLAYATTWQGMVLAIC
PYLDRYFLASAGNAFYVCGFPNDNPQRVRKFAVGRTRFMITSLTAHFTRIAVGDCRDGIL
FYSYHEEARKLEQLYCDPLQRLVADCILLDSDTAVVSDRKGNISVLCSDHLEDNASPECN
LKLRCAYYMGEVAMSIQKGSYSYRLPADDILQGGDGPKTNVDSLQHTVVATTLLGSIMIF
IRLSREEYELLEAVQARLVVHPLTAPILGNNHFEFRGRENPVGTPKMLDGDMLTQFLELT
SMQQEAILSSEPPEMVKSRLKSLPPSHFQVNQVVQLLERVHYALN
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcggaggaagagtgctcgtctgctaagtgcgggccctcatcgtcttcctcc
agcaccgcccactaccttgccaagtgcgttctcagaggaagtgtcgttcttcaggtccta
tatggtcacatccgttccccctcctccagggacgttgtgtttggcaaggaaacgtcatta
gaattggtgataattggcgaggatggggttgtacaatctatctgtgatcagcccgttttt
ggcacgattaaagatctggccatgttaccgtggaatgggaattttcatgcgtgggatcca
aagatgtggggtaaagaccttttggttgttatatctgattctgggaagctgacattgctt
acattttgcaatgaaatgcacaggttttttcctgtcacacatgttcagctatctaatgct
ggaagcacaaggcatattcctggaagaatgctagcagttgataccagtggttgttttttt
gctgtcagtgcatatgaagatcagctagctctcttttcaatgtcaatgtctaaaagcagt
gatatcattgatgagagaataacttactctgctgaaagtgaaggggctgcaaattctcat
agaagcatccaaagacgcagcataaatggtaccatttggagcatgtgctttatatcacaa
gattctaggcaactaaacaaggagcataatcctgtactagctattcttctaaataggagg
ggagagtcgctaaatgagttgcttctattagaatggaatattaaagcacgtgcagtatat
gttatttctcagtttgttgaagctggacctctagcacatgacattgttgaggttcccaat
tatcatggacttgcatttcttttcagagctggggacattctcttaatggatctcagagat
gcttgtaacccactttgtgtctacaggactagcttaaattttttatccagtgctgtggaa
gaccagacttttgtagatgattcttgtaaattacaagacgttgatgatgagcactttaat
gctgctgcttgcgcttctttggtgctgagtgattttgatcccatgtgtatagacagtgac
agtggctgttctaattcttgttacaagtatatatgttcatggagttgggagcctgaaaat
aataaagattctaagatgatcttttgcttagatagtggagaatttttcatgattgagatt
tgtttcgattctgatgaccttaaagtcaatctctcagaatgtctgtacaaaggtttagcc
tgtaaggaacttttgtgggtcgtgggtggatatttagctgcacttgtagaaatgggggat
ggcatggtcttgaaattcaaagatggaaggctatgctatagttgtcctgtccaaaacatt
gccccaatcttggatatggtagttgtggatcatcatgatgagaagcatgatcaaatgttt
gcctgctgtggtgtggcacctgaggggtcattaaggcttatccgaagtggtatctgtgta
gaacagcttttgaggactgctcctatatatcaaggagtcactggtacttggacacttaat
atgaaagctattgattcatatcattcttttcttgtgctatcatttgttgaagagaccaga
atattgtcagttggcttaagttttactgatgtgactgattctgttggttttgaacctaat
gtctgtactttgtcttgtggccttgtgagtgatggtgtgcttgttcagattcaccaatgt
gcagtgaggttatgtttgcctacaaagactgcacactatgaaggcattcctatgccctct
cctatttgcacatcctggtcaccaggcaatgtaaatatcaatttaggggctgttgggcat
aattttgtggttgtatcaacctctaatccctgttttttgctgatccttggggttaggttg
gtatcggcttatcattatgaaatttatgaaatgcaacatttggagttgcaaaatgaatta
tcttgcatttccattcctagacaaaaatttgagcaaaaacagtcagatttatccatttca
acacatagcaacttcactgcttcctttcctagtggcgacattggtaactattttgttatt
ggcacacataggccttcagtggaaattttgtcctttacacatgacagaggggttacaatt
atagcgtgtgggacaatttcatatacgagtacaatgggtacagctataagtggctgtata
cctcaggatgtacggcttgtttgtgttgataggttttatgttcttgctggattaaggaat
gggatgcttcttcgctttcagtggccatcagatcgacctgcttcaccactattaaacatg
gatgctgctttgtttaatataaatttggtacattctgaggaaaatatatctaacaaggaa
gaggactttcctgccactcttcaattgattgctatccgtcgcattggtattactcctgtt
ttcttggtgcctctgggtgacacacttgatgctgatataattgcactaagtgataggccg
tggttgttgcatagtgcaagacacagtctttcatatacttccatctcatttcagccttcc
acacatgtcactcctgtcttctctgctgagtgtccaaaaggaatgttatttgttgccaat
aactgtttacatctggtggagatggtgcatagcaagagactcaacgttcataagtttcat
ttggagggcactccacggaaggttttatatcacaatgaaagccggatattgattgtgtta
agaactgaattgaattgtgatacatgtttatctgacatatgctgtgtcgatcccctaagt
ggttcaatactgtcttcttataaacttgaacttggagaaataggaaaatccatggaacta
gtaaaggttggaggtgatcaggtgctcgtggttggaactagtctttcttctggtcctgcc
ataatgccaaacggtgaagctgagagtaccagtggccgtcttcttgttctctgccttgag
catgtgcaaaattcagatagtggttcaatgatattgtgctccaaggcagggtcattatca
caaagaacttctccgttctgtgaaattgttggatctgcccctgaacagctatcaagcagt
agccttgggagtagccctgatgataatagctctgatggtgttaaatatgatgaaaatgat
gtgtggcagttgcgattggcttatgcaactacatggcagggaatggtccttgccatctgt
ccatatcttgatcgctacttcttggcttctgctggcaatgctttctatgtttgtggtttt
ccaaacgacaatcctcaaagagtgagaaaatttgctgttggaaggacgcgttttatgata
acatctttgactgcccattttactagaattgctgttggtgattgtcgtgatggtatcctt
ttctattcttaccatgaggaagcaagaaagttggagcaactttattgcgatccattgcag
cggttagtcgctgattgcattctcttggattctgatactgctgttgtatcagatcgtaaa
ggcaacatttctgttttatgttctgatcatctggaagacaatgccagtccagaatgcaac
ttgaagctaagatgtgcttattatatgggtgaggtagccatgagcattcagaagggctca
tattcatacagacttccagcggatgatattttgcaaggtggtgatggccctaagacaaat
gtcgattcattacaacatactgtagttgctactactttgttaggaagcattatgatcttc
attcgcttgtcaagggaagaatatgagctcctagaagctgtgcaagctagactcgttgtc
catccattgactgcacctattttaggaaacaatcattttgagtttcgtggccgtgaaaat
ccagttggaacaccaaagatgcttgatggtgacatgctgactcagtttttggagctaaca
agtatgcagcaagaggccattctatcctctgaaccaccggaaatggtgaaatcaagattg
aagtcactcccaccttcacattttcaggtcaaccaggtggtccaacttcttgagcgagtt
cattatgcactcaactag
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integrated database retrieval system
