Prosopis cineraria: 129306054
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Entry
129306054 CDS
T09047
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
pcin
Prosopis cineraria
Pathway
pcin03430
Mismatch repair
pcin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129306054
03460 Fanconi anemia pathway
129306054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129306054
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129306054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
129306054
NCBI-ProteinID:
XP_054802348
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MPVDSSIIKPINKAVVHRICAGQVILDLSSAVKELVENSLDAGATSIEIALKDYGKEWFQ
VIDNGCGICPNNFKVLALKHHTSKLSDFPDLQSLTTFGFRGEALSSLCTLGSLTVETRTK
NEPIATHLTFDHSGLLVAERKTARQIGTTVTVKKIFSNLPVRSKEFGRNIRKEYGKLVSL
LNAYALIAKGVRFICTNTTGKNARSVVLKTQGSGSLKDNIVTVFGMNTLSCLEPVTLCIS
DSCKVEGFLSKPGQGSGRHLGDRQYFFVNGRPVDMPKVSKLVNEVYKGANSRQYPIAILD
FTVPSREYDVNVTPDKRKIFFSEESCLLHALREGFQQIYSPTSARYSVNEPEQPAVGEDC
VELCSSHCKSLIMDGITSQEELNTECNNASVPQEEWKEKDDNNSYIVSEPVPDDRCFHVE
ERLDIENNRSALGKDLTLRAHGTLKADISRRQTMHSNGSMPDQAAFVFKKVDNGVTSNKS
SYNNSSHVQSTLNKFVTINKRKHDNISTTLSEVPVLRNQSHHCRPKTVSSETHDLIIRPS
LHHDGTHRSEHLISSLGNSSVREPEMELDQVKEASLVDAASIAPCSTDLIHISEHVSVSD
RQFCSSNSRKSSDQKICSNLQFSFQDLQIKREKKLFMLQSSNYRCQKVNVKRCYSAANLK
FSELEIEEQKERALYAATTELERLFKKEDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAA
DEKYNYERLSQSTILNQQPLLRPLRLELSPQEEIVVSMQMDIIRKNGFTLEEDPNALPGC
RYKLKAVPFSRNIVFGIDDVKELISTLADDQGDCSITGSYKLDTSDSICPPRVRAMLASR
ACRSSIMIGDPLGRNEMQKILGHLAELKSPWNCPHGRPTMRHLVDLTTIYKRSELKNVD
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgattcgtcaattataaagcctataaataaggcggttgttcatagaatctgt
gccgggcaagtgatcctcgacctctcatctgcagtcaaggaattagtcgaaaacagcttg
gatgctggcgcgactagcattgaaattgctttgaaagattatggcaaagaatggttccag
gtcatcgataatgggtgtggtatctgtcccaataattttaaggttcttgcacttaagcat
cacacctcaaaattatcagattttcctgatcttcagtctctaaccacatttggctttaga
ggggaggcattgagttccctttgtactttagggagtttgacagttgaaacaagaacaaag
aatgagcccattgctacgcacttgacttttgaccattcaggtctattagtagctgagagg
aaaactgcacgtcaaattggcaccactgtcactgttaaaaaaatattttccaatctacct
gtccgaagtaaagaatttggtcgtaacatacgcaaggagtacggaaagttagtttcactg
ttgaatgcatatgcccttattgccaaaggtgttcgttttatctgcactaacacaactggg
aaaaatgcaaggtctgtggtacttaagacccagggaagtggttctcttaaagataacatt
gtaacagtctttggcatgaacactttaagctgcttagagcctgtgacattgtgcatatct
gatagttgcaaggttgaaggttttctttccaagcctggacaggggagtggacgccattta
ggagataggcaatatttttttgttaatggtagaccagtagatatgcctaaagtcagcaaa
cttgtaaatgaagtgtataaaggtgcaaattcacggcaatatcctattgcgattttggat
tttacagttccttctagagaatatgatgtgaatgtgactcctgataagaggaagatattt
ttttctgaagaaagttgcctattgcatgccctgagagagggatttcagcaaatttactct
cctactagtgctcgttattctgttaatgaacctgaacagcctgctgtgggagaagactgc
gttgagttgtgttcttctcattgcaagtctcttatcatggatggcattacctctcaagag
gagcttaatactgaatgcaataatgctagtgttcctcaggaggagtggaaagagaaggat
gataacaattcctacattgtttctgaacctgttcctgatgaccgatgctttcatgttgaa
gaacggcttgacattgagaataatagaagcgcattgggaaaggatttaacacttagagcc
catggaacattaaaggccgatataagtagaagacagacaatgcactctaatggctcaatg
cctgatcaagctgcttttgtgttcaaaaaagttgacaatggggttacttcaaataaaagt
tcatataataattcaagtcatgttcagtcaactcttaacaaatttgttaccataaataaa
agaaagcatgataacatcagcacaaccttatctgaagtgcctgtcctcagaaatcaatct
catcattgtcgaccaaaaactgtgagttctgaaacacatgatttgattataagaccgtca
ctccatcatgacggtacccacagaagtgagcatttaatttcctctcttggcaattcaagt
gtcagagaacctgaaatggagttagatcaagtgaaagaagcatctctagttgatgcagca
tcaattgctccatgtagcactgatttgatccatatctcagagcatgtttcagtctcagac
cgtcaattttgctcatctaattcaaggaaatcgtctgatcagaagatatgctcaaacttg
caattttcttttcaagaccttcagataaagagagagaagaagcttttcatgttgcaatcc
agtaattatagatgtcaaaaagtgaatgtcaaaaggtgctattctgccgcaaacttaaag
ttttcagagctggaaattgaagagcagaaagaaagagctttatatgctgcaacaactgaa
ttggaaagactctttaagaaggaagacttcagcagaatgaaggtgatcgggcaatttaat
cttggttttatcattgggaaattggatcaggatttatttattgtggatcagcatgctgct
gatgagaagtacaattatgaacgcctttcacaatcaaccatcttgaatcagcagcctttg
cttaggcctctaagattggagttatcccctcaagaagaaatagttgtttcaatgcaaatg
gacataatcagaaagaatggctttacgttggaagaggatccaaatgctctgcctggatgc
cgttataaattaaaggctgttccctttagtagaaacatagtctttggaattgatgatgtt
aaggaactgatttctacgttggctgatgatcaaggggactgctccattactggtagttat
aagctggacacctcagattctatttgccctccaagagttcgtgcaatgctggcatcgcgt
gcatgtcgatcatccattatgattggagatccacttggaagaaatgaaatgcagaagatt
ctggggcatttggctgagctgaaatctccatggaattgtccccatggcaggcctacaatg
cgtcatttagtggacttgacaacaatttataagaggtcagaattaaagaatgtagattga
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