Prosopis cineraria: 129306372
Help
Entry
129306372 CDS
T09047
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
pcin
Prosopis cineraria
Pathway
pcin03030
DNA replication
pcin03410
Base excision repair
pcin03420
Nucleotide excision repair
pcin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129306372
03410 Base excision repair
129306372
03420 Nucleotide excision repair
129306372
03430 Mismatch repair
129306372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcin03032
]
129306372
03036 Chromosome and associated proteins [BR:
pcin03036
]
129306372
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129306372
DNA replication proteins [BR:
pcin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129306372
DNA Replication Termination Factors
ELG1-RFC complex
129306372
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129306372
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129306372
Check point factors
HRAD17(Rad24)-RFC complex
129306372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
RuvB_N
AAA_5
Sigma54_activ_2
Mg_chelatase
DUF815
AAA_22
AAA_11
nSTAND3
AAA_29
AAA_24
AAA_23
ABC_tran
AAA_30
AAA_16
AAA_2
T2SSE
Barwin
RsgA_GTPase
TsaE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
129306372
NCBI-ProteinID:
XP_054802903
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQIVVHEEVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG
NSAEKVKVENRTWKVDAGSRSIDIELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAICSR
CLNVRINAPSEEQIVRALEFIGKKEGLQLPSGFAARIAEKSNRNLRRAILSFETCRVQQY
PFSSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE
LLKKLDAELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKAFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtagataagtatcgacccaaaaccctcgaccagattgtggtccacgaagaa
gtcgcccaaaatcttaagaaactggtgacggagcaggattgcccgcatttgcttttctat
ggcccgccagggtctggcaaaaaaaccctaatcatggctcttctccgacaaatgtttggg
aacagtgccgagaaggtgaaggtggaaaataggacatggaaagtggatgctggaagtaga
tctattgatatagagctgacaacattatcaagtgccaatcacatagaaatgagccccagt
gatgcaggctttcaggacagatatattgttcaagaagtaattaaggaaatggctaaaaat
agaccaattgataccaaggggaagaaaggatttaaagtactagtgctcaatgaggttgac
aaactctctagagaagctcagcattctctgcgcagaacaatggagaaatacagcgcttat
tgcaggttaattctatgctgcaatagttcttcaagagttacagaagcaatctgctctcgc
tgtttaaatgtgcgaataaatgcaccaagtgaagagcagatagttagagcattggagttc
attggaaagaaagaagggctgcaacttccttctggatttgctgctcgcatagcagagaaa
tcaaatcggaacctaaggcgggccatattgtcttttgaaacttgccgtgtccaacagtat
cctttcagtagcaagcaaacaataccaccaatggattgggaggaatatatttctgaaatt
gcatctgacataatgaaagaacaaagcccaaaaaggttgtttcaagttcgagggaaattg
tatgagctcttaatcaactgtatccctcctgagatcatcttgaagaggcttctttatgaa
ctgttgaagaaattggatgcagaattaaagcttgaggtctgccattgggcggcttattat
gagcatagaatgcgtcttggacagaaggccatcttccacattgaagcatttgtggctaaa
ttcatgagcgtttataaagccttcctaattgcgacatttggctga
DBGET
integrated database retrieval system
