KEGG   Prosopis cineraria: 129306486
Entry
129306486         CDS       T09047                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcin  Prosopis cineraria
Pathway
pcin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129306486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcin03041]
    129306486
Spliceosome [BR:pcin03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    129306486
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 PRP4 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SCAP WD40_RFWD3 eIF2A WD40_like Beta-prop_SPT8
Other DBs
NCBI-GeneID: 129306486
NCBI-ProteinID: XP_054803083
LinkDB
Position
Unknown
AA seq 570 aa
MEVEDEKTTSTVSTETSVPTSDAQSMVSPIPAVQPVIPTVVPPSVVPPIAPIPSIPPSTT
LRPLAPLPVRPPSIRPPVSQNGEVRSTDSDSDHDDLGPGINKGTGEYEISEESRVVRERQ
EKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMAKLDAE
GQLEKLMKAHEDEEAAASSAKDEAEEDLQYPFYTEGSKALLDARVDIAKFSLVRAATRLH
RAQRRRDDPDEDIDAEINWALNQAENLVLDCSEIGDDRPLSGCSFSADGKWLATCSLTGA
AKLWSMPEVQKISTLKGHFERATDVAYSPVHNHLATASADRTARYWNDQGSLLQTFEGHL
DRLARISFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGLDFHHDGSLAASC
GLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLY
IIPAHSNLISQVKFEPHEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDVLGD
GRYIATVSHDRTIKLWSSNMASEQAMDVEC
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggaagtcgaggacgaaaagactacctctactgtttctacggaaacctctgtaccaaca
tctgatgctcaaagcatggtttctcctattcctgcggtgcagcctgtaattccgacagtc
gttccaccatctgttgtgcctcctattgctccaattccttcaattcctccctccactact
ctccgcccactggcaccacttcctgttcgtccaccttctattaggccacccgtgtcgcaa
aatggtgaggttagatcaactgactcagattcagatcatgatgacttaggacccgggata
aacaagggtacgggggagtatgagatatcagaagagagtagagtggtaagagaaaggcag
gaaaaggcaatgcaggaacttatgatgaagaggcgcgctgctgctctggctgttcctaca
aatgacatggctgtgcgggctcgtcttcgccgtctcggtgaacccatcactctcttcggt
gaaagggaaatggagagaagagataggttgcgaatgattatggccaagttggatgctgaa
ggtcagctggaaaaactgatgaaagctcatgaagatgaagaggccgcagcttcttctgcc
aaagatgaagccgaggaagacctacagtatcccttttacactgaagggtcaaaggccctc
ctggatgccagagttgatattgctaagttttctttagtaagagcagcaacacgtctgcat
cgtgctcagagaagaagagatgatccagatgaagatatagatgcggaaataaattgggcg
ttaaaccaggcagagaacttggttcttgattgcagtgagattggagatgatcgtccactt
tctggttgctccttctcagcagatggaaaatggcttgctacctgttccctgactggagct
gcgaaactttggagcatgcctgaagttcaaaaaatttctaccttaaagggccacttcgag
cgtgctactgatgttgcctactctcctgtgcataaccatttagcaacggcctctgctgac
cgcactgcaaggtattggaatgatcaaggatctcttttacagacatttgagggtcatctt
gaccgtcttgctcgcatttccttccatccatctgggaagtacctgggcactgctagcttt
gacaagacatggagattgtgggatgtagaaacaggagaggagttgcttctccaagaaggt
cacagtaggagtgtatatggtttagatttccaccatgacggatcattagctgcatcttgc
ggactggattcacttgctcgagtttgggaccttcgtactgggagaagtattcttgccctg
gaaggtcatgtcaagccggttcttggcatcagtttttcacccaatggttatcatttagcc
acaggtggcgaagacaacacttgtcgcatttgggatttgagaaagaagaaatccttgtat
atcattccagctcactctaatttaatatcacaagtcaaatttgagccacatgagggttat
tttttggtaacagcttcgtatgatatgacagctaaggtatggtcagctcgtgattttaag
cctgtcaaaactttatctgggcatgaagcaaaagttacttctctagatgttcttggagat
ggacggtacattgctactgtctcccatgatcgaaccattaagttgtggtccagcaacatg
gctagtgagcaagccatggatgttgagtgttga

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