Prosopis cineraria: 129306486
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Entry
129306486 CDS
T09047
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129306486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129306486
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129306486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Aladin
PRP4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_RFWD3
eIF2A
WD40_like
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
129306486
NCBI-ProteinID:
XP_054803083
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MEVEDEKTTSTVSTETSVPTSDAQSMVSPIPAVQPVIPTVVPPSVVPPIAPIPSIPPSTT
LRPLAPLPVRPPSIRPPVSQNGEVRSTDSDSDHDDLGPGINKGTGEYEISEESRVVRERQ
EKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMAKLDAE
GQLEKLMKAHEDEEAAASSAKDEAEEDLQYPFYTEGSKALLDARVDIAKFSLVRAATRLH
RAQRRRDDPDEDIDAEINWALNQAENLVLDCSEIGDDRPLSGCSFSADGKWLATCSLTGA
AKLWSMPEVQKISTLKGHFERATDVAYSPVHNHLATASADRTARYWNDQGSLLQTFEGHL
DRLARISFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGLDFHHDGSLAASC
GLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSLY
IIPAHSNLISQVKFEPHEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDVLGD
GRYIATVSHDRTIKLWSSNMASEQAMDVEC
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgaggacgaaaagactacctctactgtttctacggaaacctctgtaccaaca
tctgatgctcaaagcatggtttctcctattcctgcggtgcagcctgtaattccgacagtc
gttccaccatctgttgtgcctcctattgctccaattccttcaattcctccctccactact
ctccgcccactggcaccacttcctgttcgtccaccttctattaggccacccgtgtcgcaa
aatggtgaggttagatcaactgactcagattcagatcatgatgacttaggacccgggata
aacaagggtacgggggagtatgagatatcagaagagagtagagtggtaagagaaaggcag
gaaaaggcaatgcaggaacttatgatgaagaggcgcgctgctgctctggctgttcctaca
aatgacatggctgtgcgggctcgtcttcgccgtctcggtgaacccatcactctcttcggt
gaaagggaaatggagagaagagataggttgcgaatgattatggccaagttggatgctgaa
ggtcagctggaaaaactgatgaaagctcatgaagatgaagaggccgcagcttcttctgcc
aaagatgaagccgaggaagacctacagtatcccttttacactgaagggtcaaaggccctc
ctggatgccagagttgatattgctaagttttctttagtaagagcagcaacacgtctgcat
cgtgctcagagaagaagagatgatccagatgaagatatagatgcggaaataaattgggcg
ttaaaccaggcagagaacttggttcttgattgcagtgagattggagatgatcgtccactt
tctggttgctccttctcagcagatggaaaatggcttgctacctgttccctgactggagct
gcgaaactttggagcatgcctgaagttcaaaaaatttctaccttaaagggccacttcgag
cgtgctactgatgttgcctactctcctgtgcataaccatttagcaacggcctctgctgac
cgcactgcaaggtattggaatgatcaaggatctcttttacagacatttgagggtcatctt
gaccgtcttgctcgcatttccttccatccatctgggaagtacctgggcactgctagcttt
gacaagacatggagattgtgggatgtagaaacaggagaggagttgcttctccaagaaggt
cacagtaggagtgtatatggtttagatttccaccatgacggatcattagctgcatcttgc
ggactggattcacttgctcgagtttgggaccttcgtactgggagaagtattcttgccctg
gaaggtcatgtcaagccggttcttggcatcagtttttcacccaatggttatcatttagcc
acaggtggcgaagacaacacttgtcgcatttgggatttgagaaagaagaaatccttgtat
atcattccagctcactctaatttaatatcacaagtcaaatttgagccacatgagggttat
tttttggtaacagcttcgtatgatatgacagctaaggtatggtcagctcgtgattttaag
cctgtcaaaactttatctgggcatgaagcaaaagttacttctctagatgttcttggagat
ggacggtacattgctactgtctcccatgatcgaaccattaagttgtggtccagcaacatg
gctagtgagcaagccatggatgttgagtgttga
DBGET
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