Prosopis cineraria: 129306487
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Entry
129306487 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129306487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129306487
Enzymes [BR:
pcin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
129306487
DNA repair and recombination proteins [BR:
pcin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
129306487
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
129306487
NCBI-ProteinID:
XP_054803084
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MKQLVSRNCSYLTSFAGVQKLNSKILVCPRVEAMRSKRSFSNSPEPVPPIVESKKNKKLE
VLRTSSSSKKPIVEENEFDSYSIEIERLKSDPAKIEKMTVQELRNTLRIVKVPAKGRKDD
LVSALKSFMDNKMWGQGSQLTEEQGLLISADSTSISLKAKKLSDKGTVDDIQLGSDGKNV
KVATKKKMAVKYEEVSGLKPSRQKRKASADIVGDVAQSEQVNAPIVLTEPWTVLAHKKPQ
KGWIAYNPSTMRPPHLTRDTKFIKFLSWNVNGLRALLKLDGFSALQLAQREDFDVLCLQE
TKMQEKDIDMIKSSLIDGYENSFWTCSVSKLGYSGTAIISRVKPLSVRYGLGIPDHDSEG
RIITAEFESFYLISGYVPNSGDGLKRLSYRTTQWDPSLSNYMKELEKSKPVILTGDLNCA
HEEIDIYNPAGNRRSAGFTDEERNXFTENFLSKGFVDTFRRQHPGVVGYTYWGYRHGGRK
ANKGWRLDYFLVSESIADKVHDSYILPDVAGSDHCPIGLVVKL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaactggtgtctagaaattgttcatatctcaccagctttgcaggggtccagaag
ctgaatagtaagatactggtttgtccaagagtggaagcaatgaggtctaaaagatccttc
tcaaattcaccagaacctgtgccaccaattgttgaaagcaaaaaaaataagaagcttgaa
gtattgcgaacgagctcaagttctaagaagcctattgtagaggaaaacgaattcgatagc
tactccattgagattgagagattaaaaagtgacccggccaagatagaaaaaatgacggtt
caggaactacggaatacattaaggattgttaaggtccctgccaaaggtcgtaaagatgat
cttgtgtctgccttgaagtctttcatggacaataagatgtggggacaaggttctcaacta
acagaagaacaagggctattaatttctgctgatagcacttcaataagtttgaaagctaaa
aagctatcagataaaggcacagttgatgatatacagctgggatctgacggcaaaaatgtc
aaagtggcgaccaagaagaagatggcagtgaaatatgaagaggtgtcaggtttgaaacct
tcccggcaaaagagaaaagcatctgcagacattgtgggtgatgttgcacagtcagaacaa
gtcaatgcacccattgttttaactgaaccatggactgttctggcacacaagaagccacag
aaaggatggattgcgtataatcctagtactatgagacctccacatcttactcgggataca
aaatttatcaagtttttgtcttggaatgtcaatggattgagagctttattgaaactagat
ggattttcagcccttcaacttgcccaaagggaagattttgacgtgttgtgcttgcaagag
actaaaatgcaggagaaggatattgacatgatcaaatcctccttaatagatggctatgag
aacagtttctggacatgtagtgtgtctaaacttggttactctggaacagcaataatctca
agggtaaagccactttcggtcagatatggcttaggcataccagatcatgatagtgaaggg
agaatcataactgcggagtttgagtcattttatttaatttctggatacgtccctaattct
ggagatggcttaaaaagactgtcttacaggactactcagtgggatccatctctcagtaat
tatatgaaagagctggaaaagtcaaaaccagtaattttaactggtgatctaaattgtgct
catgaagagatagacatatataaccctgctggaaatagaagaagtgctggttttacggat
gaagaaaggaacnttttcacagaaaacttcttatcaaagggatttgtggataccttcaga
aggcagcaccctggggtagttggatatacttactggggttatcgacatggtgggcgcaag
gctaacaaagggtggcgattggattatttccttgtttcggaatccatagctgacaaggtt
cacgactcctacattctccccgatgtagctggcagtgatcattgccctattggccttgtt
gtcaagttgtag
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