Prosopis cineraria: 129307186
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Entry
129307186 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
pcin
Prosopis cineraria
Pathway
pcin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129307186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129307186
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
129307186
Prokaryotic type
Archaeal type
TFB
129307186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
DUF7245
Zn_ribbon_8
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
129307186
NCBI-ProteinID:
XP_054804045
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAFCTDCKRQTEVVFDHSTGDTVCSECGLVLESHSIDETSEWRIFANESADNDPVRVG
GPTNPLLTDGGLATVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEVYKRVEDQKSSRGRNQDALLAACLYIACRXEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQESVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPSWY
AKEEDLKNLCGP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcgttctgcaccgactgtaagcgtcaaacagaggtggtcttcgatcactcg
actggtgacactgtgtgttctgagtgcgggctcgtgcttgagtcccattccattgatgaa
acttccgagtggcgtatattcgcgaacgagtctgcggacaacgacccggttcgtgtcggt
ggacccactaacccgctcttgactgacggcggcttggccaccgtcatagcaaagcccaat
ggcacctccggcgaatttctatcgtcgtcattgggtcggtggcagaatcgcgggtcgaac
cctgatcgagggctgattctggctttcaagacaattgctactatgtcagataggttggga
cttgttgcgaccattaaggatcgggctaatgaagtatacaagagggttgaagatcagaag
tccagtaggggaagaaaccaggatgctttgttggctgcttgcctttacatagcttgtcga
ncggaagacaaaccacgtactgtaaaggaaatttgctctgttgccaatggagctaccaag
aaggaaattggccgagcaaaagaatatatagtaaaacaactgggtttggagaagggtcag
tcagtggagatgggaacaatacatgccggggactttatgaggcgattttgttctaatctt
ggcatgaataatcaagcggttaaagctgctcaggaatctgttcagaaatctgaagaattt
gatataaggaggagccccatatcaattgctgcggctgtgatatacattataactcagctc
tcagatgataaaaaacctctcaaagatatatcagtggccacgggagtggcagaaggaacc
atcaggaactcctacaaggatctttatcctcatgtttccaaaatcataccaagttggtat
gctaaggaggaggaccttaagaatctttgcggcccttga
DBGET
integrated database retrieval system
