Prosopis cineraria: 129307229
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Entry
129307229 CDS
T09047
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pcin
Prosopis cineraria
Pathway
pcin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129307229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129307229
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
129307229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
129307229
NCBI-ProteinID:
XP_054804095
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MRSRGSSKRKRRASSSENETRALHNLEGRSQFQPPSDIGMLDKTFQEAGAKFLSCADKVG
SSLKETDDSNLHLDHSIGMSESERNDYQALEPVLPPETLENGHCSRNVMKNASLKEKCDD
VSLDKSHWNNKEELDDSDWEEGSIAPDDHPMTIELNVTPDLSTQKRIRRASAQDKGFAEL
VHKVHLLCLLSRGRLIDKVCDDPLIQASLLSLLPEHLIQLSNVTKLTSKALHPLVAWFHN
NFRVKKFTSGEMSFHSAVASALETREGSFEEVAALSVALFRALNLTTRFVSILDVASLKP
GQSFRSDATGSSKGVFNAPTVMVSRPEEDLRHPKKLFSGYERENSSESSLGQSHERKEYH
STSHLTESTNPPFAHELNGSVSNSRNSETEHNHPECLTNQTGKAKRKGDLEFEMQLEMAL
SATAIGDELNKKESCLRILNANSENSPSKRIKRIICDESLTFPREMSTAVGPMKFGSPLY
WAEVYCGGENLTGKWVHIDTINLIIDGEHKVESMAAACKTSLRYVLAFAGQGAKDVTRRY
CTKWHKIASQRVNSMWWDSVLAPLRELESGATEGVVHVETNQAISAESRKGNSFAPTRSS
LEDIELQTRALTEPLPTNQQAYRSHPLYAIEKWLTKYQVLHPKGPILGFCSGLPVYPRTC
VQTLKTKGRWLREGLQVKSNEHPAKLLKSSVKHQKVQDSEADDYGGSDSKENIEFYGKWQ
LEPLNLPHAVNGIVPKNERGQVEVWSEKCLPPGTVHLRFPKAFAVAKRLEIDYASAMVGF
EFKNGRSHPVFDGIVVCAEFKDVLLEAYAEEEERTRAEARKRDEAKALSRWYQLLSSIVT
RQRLNNRYNTSFPSETSTDNQSRDNKELNAMVSGGYGEKSPRNQVTGCDAAEVEVPSIRQ
ANEHHEHVFLKEYESFDEESSLLTKRCQCGFSVQVEEL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagaggtagttccaagcgaaagagacgtgcctcatcctcagaaaatgaaacg
agagctctacacaacttggaaggtagaagccaatttcagccgccaagtgatattggaatg
ctggataaaacattccaggaggcaggggccaagttccttagctgtgccgataaagttggc
tcttccttgaaagagacagatgatagtaatcttcatttagatcattcaattgggatgtct
gagtcagaaagaaatgactatcaagccttggaaccagtcctgccaccagagactttagag
aatggacattgcagtagaaatgttatgaaaaatgcttctttgaaagagaaatgtgatgat
gtaagtttagacaaaagccactggaacaacaaggaagaactggatgactcagattgggaa
gagggttcaattgccccagatgatcatcctatgactattgaattgaatgtgacccctgat
ttatctacacagaaacgaattcgccgtgcttcagcccaggataagggctttgctgagctt
gtgcacaaggttcatttgctttgtttactttctcgtggaagattaattgacaaagtctgt
gatgatcctctaattcaggcttcgttgctttctctacttccagaacacctgatccagcta
tcaaatgtcaccaagctcacttcaaaagctttacatcctcttgttgcatggtttcataat
aattttcgtgttaaaaagtttactagtggagaaatgtcatttcattctgctgtggcatca
gctcttgaaacacgtgagggtagttttgaggaggttgctgcattatcagttgccctattt
agagctttgaatcttacaacaaggtttgtctccattttggatgttgcctctcttaaacca
ggtcaatcctttagatctgatgcaactggatctagtaagggtgtatttaatgctccaaca
gtgatggtatccaggccagaagaagaccttaggcaccctaaaaaattgttttcaggctat
gagagagaaaattccagtgaaagttctcttggccaatcacatgaaaggaaggaataccac
tcaacgagtcatttgactgagtccacaaatcccccttttgctcatgagctgaatggtagc
gtgtccaactcacgaaattctgagacagaacataatcaccctgaatgtctcactaaccag
actggtaaagcaaagaggaaaggggatcttgagtttgaaatgcagttggaaatggctctt
tctgctacagcaattggggatgagttgaacaaaaaggagtcatgtctgagaatcttgaat
gctaattcagaaaattctccatcgaaaagaatcaaaaggattatatgtgatgaatcttta
accttcccgcgtgaaatgtctacagcagttggaccaatgaaatttggatctcctctgtac
tgggcagaagtatattgcggtggagagaatttgaccggaaagtgggttcatattgatact
atcaatttgattattgatggagaacacaaggtcgaatccatggctgctgcatgtaaaaca
tctttgagatatgttcttgcttttgcaggtcagggagccaaagatgtgacccgcaggtac
tgtacaaagtggcacaagattgcgtcacaacgagttaattcaatgtggtgggattcagtt
ctggcaccactgagagagctagaatcaggtgcaactgaaggagtggttcatgtggaaaca
aaccaagctatatctgcagaatccagaaagggtaattcatttgcaccaactcggagctcc
cttgaggatattgagttgcagaccagggcattaactgaacctcttccaactaatcagcag
gcttacagaagtcatccactttatgcaatagagaaatggcttaccaagtatcaagttctt
catcccaagggcccaattcttggcttttgttcaggccttccggtttacccaaggacttgt
gtgcagacgcttaagacaaaagggaggtggcttcgggaagggctgcaagttaaatccaat
gaacatcctgcaaagctgctcaaatcttctgtaaaacatcaaaaagtacaagattctgag
gctgatgactatggtggcagtgattctaaggaaaatattgaattctatgggaagtggcaa
ctggaacctctaaatctgcctcatgctgtaaatgggatagttcctaagaatgagcgtggt
caagttgaagtttggtctgagaaatgccttcctccagggaccgtgcacttgaggtttcca
aaggcatttgctgttgcaaagaggctagaaattgattatgcgtctgccatggttggtttt
gaatttaaaaatggccgttcacatcctgtctttgatggcattgtggtgtgtgctgagttc
aaggatgttcttctagaggcatatgctgaggaggaggaaagaacacgggctgaagcgagg
aaaagggatgaagcgaaagctctttctcgatggtatcaacttctttcatcgattgtgact
cgtcagcggctaaataatcgttataataccagttttccatcagagacatcaactgataac
caatccagagacaacaaagaattgaatgccatggttagtggtggttatggcgagaagagt
ccccgaaatcaggttaccggatgtgatgctgctgaggttgaagttccctccattagacaa
gcaaatgagcatcatgagcatgtgtttctgaaagagtacgagagctttgatgaggagagc
tccttacttactaagcggtgccaatgtggattttcagtccaagtagaagaactgtga
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