Prosopis cineraria: 129307363
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Entry
129307363 CDS
T09047
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
pcin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129307363
03015 mRNA surveillance pathway
129307363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129307363
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129307363
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129307363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
129307363
NCBI-ProteinID:
XP_054804272
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MAESASGDSSNTTPTPESKPAATERKSCADEAEEEVLPETNAGFGSSSASSLNVDKLAID
ENKKTTKFLDEPEDSNIQAVTSGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQA
ISLPMILSPPFKDLIAQAHNGSGKTTCFVLGMLSRVDHKLKAPQALCICPTRELAIQNTE
VLRKMGKYTGIGSECAIPADSRDSIPIAKRAPIMAQVVIGTPGTIKKWMSFKKLSASRLN
ILVFDEADQMLAEDGFKDDSLRIMKDIERVNANCQVLLFSATFNEIVKNFVSRTVKKDHN
QLFVKKEELSLESVKQYRVNCLDELSKIEVIKDYIFEIGENVGQTIIFVRTRNSASVLHK
ALADLGYEVTSIQGALQHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLP
VKHTAEYTREQEPDYEVYLHRVGRAGRFGRKGAVFNLICGGRDANLMAKIEKHFGTQVTE
VREKSAEDYKAVLREAGLLQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcagcatctggtgactcctccaacacaactccgactccggagagcaaacca
gcggctaccgagcgtaaaagttgcgcagatgaagctgaggaagaagttctaccagaaacg
aatgcgggcttcggttcatcatcagcctcctcgcttaacgttgacaaattagccatagac
gagaataagaagactactaagttcttggacgaaccggaggactccaacatacaagcggtt
acatctggtgatactccatatacgtcagcgagcacctttgaagatttgaatctctctcca
gagctgctaaaaggactgtatgttgagatgaaatttcagaagcctagcaaaattcaagct
atcagtttgccgatgatcttgagccctccttttaaggatctgattgcacaggcacataat
ggttcaggcaagacaacatgttttgtgctagggatgctaagtcgcgttgaccacaagctg
aaggctcctcaagctctttgcatttgtccaacgagagaattagctattcagaacacggaa
gttcttcggaagatggggaaatacactggcattggttcagaatgtgccataccagcagat
agcagagattctattccaatagcaaaacgggcacctatcatggcacaagtagtgatcggg
actcctggaacaatcaaaaagtggatgtcatttaagaaactgagtgcatccagattaaat
attctggtctttgatgaggctgatcaaatgcttgcagaggatggttttaaagatgattct
ttgaggataatgaaagatatagagagagtcaatgctaactgtcaggttcttctgttttct
gctacatttaatgaaattgtcaagaattttgtttcaagaacagttaagaaggatcataat
caactttttgtaaagaaagaagaactgtctttagagtcagtgaagcaatacagggtgaat
tgtcttgacgaactctctaagattgaagtgatcaaagattacatctttgaaataggtgag
aatgtgggccaaacaattatatttgtgcgcacaagaaatagtgcaagcgtgttgcataag
gcacttgctgatctgggctacgaggttacttccattcaaggcgctcttcagcatgaggaa
agagataagattgtcaaggagttcagagatggtttgactcaagtgctgatatcaactgat
gttcttgcccgaggctttgatcaacaacaggttaatctggttattaattatgatcttcca
gtgaaacatactgctgagtatactcgtgaacaggagcccgattatgaggtgtatttgcac
agggttggtagggctggacgttttgggcgcaagggggctgtgtttaaccttatatgtggt
ggaagggatgcaaatctcatggcgaagattgagaagcactttggcacccaagtaactgag
gtccgagaaaaaagcgctgaagactataaagcagttcttagggaggctggtttattgcaa
taa
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