Prosopis cineraria: 129307882
Help
Entry
129307882 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 6
KO
K03257
translation initiation factor 4A
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129307882
03012 Translation factors [BR:
pcin03012
]
129307882
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcin04147
]
129307882
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129307882
mRNA cycle factors
Stress granule specific factors
129307882
Translation factors [BR:
pcin03012
]
Eukaryotic type
Initiation factors
eIF-4
129307882
Exosome [BR:
pcin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129307882
Exosomal proteins of bladder cancer cells
129307882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR41
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_ACSF4
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
129307882
NCBI-ProteinID:
XP_054804796
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MRGDATHWDENAYREVILKEREIETRTIFRTAWAPTRNPNADTLVVASSDGSIASYSIPS
IISNLPFGLTNIKTQKLFAEPTCFFQGHDGPAYDVKFYRDDEDALLLSCGDDGRIRGWRW
KELVGLNDSSSLAGSGIKPLLELVNPQHKGPWGALSPIPENNAIAVDTKEGSVFTASGDX
CAYCWDVATGKMKTVFKGHLDYLHCLVARNSANQIITGSEDGTARIWDCKSGKCIKVFDP
AKDLKSKGYVSWISCVALDASESWLACSYGRNISLWNLPASACISKIPTRASVQDMLFDN
NQILAIGADPLLNRFDMNGVILSQIQCASPSSFSISLHPSGIMAAGGYGSLVDVISQFGS
HMCTFRCRSL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagacgctacccactgggacgaaaatgcttacagggaagtcatattgaaggag
agggagattgaaacccgaaccatttttagaaccgcctgggctcctacccgaaacccgaac
gctgataccctcgttgttgcgtcaagcgacggatccatcgcctcttattctattccttca
atcatctctaacctcccgtttggtcttaccaacataaagacacaaaaattgtttgctgaa
ccaacttgcttctttcaagggcacgatggacctgcttatgatgtcaaattttaccgggac
gatgaagatgctctgttattgagttgtggtgatgatggtcggattcgaggatggagatgg
aaggaacttgtaggattaaacgattcttcatctttggctggaagtggtatcaagcctttg
cttgagctggtgaatcctcaacacaaaggtccttggggtgccctttcacctattcctgag
aataatgctattgctgttgatactaaggaaggatctgttttcactgcttctggtgatntc
tgcgcatattgttgggatgtggctactggtaaaatgaaaactgtatttaaggggcacttg
gactacttgcattgtttagttgcccgaaactcagccaatcagattataacaggttcagag
gatgggactgcacgaatttgggattgcaaaagtggaaagtgtatcaaagtgtttgatcct
gcaaaagatttgaagtcaaaaggatacgtttcatggattagttgtgttgcattagatgca
agtgagagctggttggcctgtagctatggtcggaatatatcactctggaacctgcctgct
tcagcgtgcatatcaaagattccaacgcgtgcttctgtacaggacatgttatttgacaac
aatcaaatattggcaatcggtgcggatcctctacttaatcgatttgacatgaacggtgtg
atcctttcacaaatacagtgcgcttctccatcatccttctctatctccttgcatccatcg
gggatcatggcagctggaggttatggttctcttgtggatgttatctcccagtttggaagt
cacatgtgtacgtttcgttgccgaagtctttaa
DBGET
integrated database retrieval system
