Prosopis cineraria: 129307934
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Entry
129307934 CDS
T09047
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00040
Pentose and glucuronate interconversions
pcin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129307934
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129307934
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
129307934
NCBI-ProteinID:
XP_054804863
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MTSFFFFLCILLIPTLICSSPFHDPESIVQEVNRKINASVARRNLGYLSCGTGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKNAIGGRNGRIYVVTDAGDDDPVNPRPGTLRYAVIQDEP
LWITFARDMVIQLKEELIMNSLKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIHDCKQ
GGNAMVRSSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCKDGLVDAIMGSTAITISN
NYMTHHDKVMLLGHSDSHTQDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNNDYTHWE
MYAIGGSASPTINSQGNRFMAPNDRFSKEVTKHEDAPESEWRGWNWRSEGDLLLNGAFFR
ASGAGASSSYARASSLSARPSSLVGSLTSGAGTLSCRKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacttccttcttcttcttcctctgtattctcctcatcccaaccctcatttgctcttcc
cctttccacgaccctgaatccatcgtccaagaagtgaacaggaaaatcaatgcctctgtc
gctaggcggaatttgggctacctctcgtgtggaactggcaaccctatcgacgattgctgg
aggtgcgatcctaattgggagaagaacaggcagaggctagccgattgtgcgatagggttc
gggaagaacgccattggcgggagaaatggaagaatttacgtggtgacggacgccggcgat
gatgatccggtgaatccccggccgggcactctccgatacgccgtgattcaggacgaaccg
ttgtggattacattcgcgagggacatggtgattcagttgaaggaggagcttatcatgaat
tccttaaagaccatcgacggacgaggcgcgagcgtgcacattgcgggcgggccctgcata
acgatccagtacgtaaccaacattataatccatggaatccacatacacgactgtaagcag
ggagggaacgccatggtgaggagctccccacggcactacgggtggagaaccgtatcggac
ggcgacggcgtgtccatcttcggaggcagccacgtgtgggtggatcactgctcgctgtcg
aactgtaaagatggtctggtcgacgcgattatggggtccaccgcgataaccatttctaac
aattacatgacgcaccatgacaaggtcatgttactgggtcacagcgattctcatacacaa
gacaagaacatgcaagtcaccatcgcttttaatcacttcggagaaggcctcgtccaaaga
atgccgagatgtaggcttggatatttccatgtggtgaacaatgactacactcattgggaa
atgtatgccattggaggaagtgctagcccaaccatcaatagccaaggcaacagattcatg
gcacccaatgacagatttagcaaagaggtgacaaagcacgaggatgctccagagagtgaa
tggaggggctggaattggagatcagaaggagacttgttgctgaacggtgcgtttttcagg
gcatcaggtgcgggagcctcctctagctatgcaagggcttctagcttgagtgccaggcct
tcttctctggtgggttcgctcacctcaggcgccggcacactcagctgcaggaaaggttct
cgctgctga
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