KEGG   Prosopis cineraria: 129308310
Entry
129308310         CDS       T09047                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
pcin  Prosopis cineraria
Pathway
pcin03020  RNA polymerase
pcin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129308310
  09124 Replication and repair
   03420 Nucleotide excision repair
    129308310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcin03021]
    129308310
   03400 DNA repair and recombination proteins [BR:pcin03400]
    129308310
Transcription machinery [BR:pcin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     129308310
DNA repair and recombination proteins [BR:pcin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129308310
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Cas12f1-like_TNB Zn_ribbon_4
Other DBs
NCBI-GeneID: 129308310
NCBI-ProteinID: XP_054805362
LinkDB
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEAADNNCVYRNEIHHSVGERTQVLQ
DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaagttttgccgcgaatgcaacaacattctttatcctaaagaggacaag
gagcagaagattcttctctatgcttgccgtaactgtgatcaccaggaggctgcggataat
aactgtgtctatagaaatgagatacatcattctgttggggagcgcactcaagtgttgcag
gatgtagctgcagatcctactcttcctcgcacaaagtccgtccgttgtactcaatgcaac
catggagaagctgtttttttccaggcaacagccagaggggaagaaggtatgacactgttt
tttgtttgctgcaacccgaactgtggccaccggtggagggattaa

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