KEGG   Prosopis cineraria: 129308769
Entry
129308769         CDS       T09047                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pcin  Prosopis cineraria
Pathway
pcin03030  DNA replication
pcin03410  Base excision repair
pcin03420  Nucleotide excision repair
pcin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129308769
   03410 Base excision repair
    129308769
   03420 Nucleotide excision repair
    129308769
   03430 Mismatch repair
    129308769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcin03032]
    129308769
   03400 DNA repair and recombination proteins [BR:pcin03400]
    129308769
Enzymes [BR:pcin01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     129308769
    6.5.1.6  DNA ligase (ATP or NAD+)
     129308769
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     129308769
DNA replication proteins [BR:pcin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    129308769
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     129308769
DNA repair and recombination proteins [BR:pcin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     129308769
   NER (nucleotide excision repair)
    Other NER factors
     129308769
   MMR (mismatch excision repair)
    Other MMR factors
     129308769
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 129308769
NCBI-ProteinID: XP_054806093
LinkDB
Position
Unknown
AA seq 798 aa
MLSFRSCFSPPFFHPVKSLFRLEFSLTPPKTFLFKPIFLSAHNRCGNMSSRPSAFDALMS
GARAAAKKKPQSSSPGKRKAPDSNSTQNPKTLKCTESTGQSLEPSNDTKSTDIKDSEKAQ
EPTKEHLSNGGLTGSEGALAAKRMRVVGSQEKITELKKKVSLLKKKPTDFDPSSMSCWEK
GEPVPFLFLGLAFDMIAEETGRIVITDIVCNMLRTVMNTTPEDLVAVVYLSANKIATAHE
GLELGIGDASIIKALAEACGRTEVQIKNQYKEKGDLGLVAKASRSSQAMMRKPDPLTIRK
VFNTFRLIAKESGKDSHEKKKNHIKGLLVAATDCEPQYLIRLLQSKLRIGYAEQTLLAAL
GQAAVYTEGHSIPPPKVQSPLEEAAKIVKQVYSVLPVYDKIIPALLSGGVWKLPETCHFT
LGVPVGPMLSKATKGVSEVLNKFQDAEFTCEYKYDGERAQVHYMDNGSVEIYSRNAERNT
GKFPDVVAAISRVKKSSVSSFVLDCELVAYDREKKKILPFQVLSTRARKNVSMSDIKVDV
CIFAFDILYLNGKPLLQENLKIRREHLYASFEEEPGFFQFATAITSNDVEEIQKFLDAAV
DASCEGLIIKTLYEDATYEPSKRSLNWLKLKKDYLENIGDSLDLVPIAAFHGRGKRTGVY
GAFLLACYDSNNEEFQSICKIGTGFSEATLEERSASLRTKVIPKPKPYYRYAETINPDVW
FEASEVWEVKAADLTISPVHRAAVGIVDSDKGISLRFPRLVRVRDDKAPEQASSSEMVAE
MYSAQKHNHPNNHDDEED
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgctctcatttcgttcttgcttctctcccccattctttcaccccgtcaagtctctcttt
cgtctcgaattttctctcacaccccctaaaactttcttgttcaagcccatcttcctttca
gctcataatcgctgtggcaacatgtcgtcacgaccgtctgcctttgatgctctcatgtct
ggggctcgtgccgctgccaagaaaaagccccaatcatcatcgcccgggaaacgaaaagcc
ccggattctaattcaacccaaaaccctaaaaccctcaaatgcacggaaagtactggtcag
tctttggaacccagtaacgatactaagtccactgacattaaagattccgagaaggcacaa
gaaccgaccaaagaacacttgagcaacggggggctgacagggtctgagggtgcacttgcg
gcgaagagaatgcgcgtcgttggttcccaggagaagattacagagctgaagaaaaaagtt
tctcttttgaagaagaaacctacagattttgaccctagttccatgtcttgttgggagaag
ggtgaacctgtgccctttctgtttctcggtttggcatttgatatgattgcagaagaaaca
ggacgcattgtgattacagatatagtgtgcaatatgctgaggactgttatgaacactaca
cccgaggatctggtggctgttgtttatctttccgcaaataagattgccactgcacatgaa
gggttggaattgggaataggggatgcttcaattatcaaggcgcttgcagaggcatgtgga
aggactgaggtgcagataaaaaatcagtataaggaaaaaggtgatttgggccttgttgcc
aaggcaagccgctcgtctcaagcaatgatgcggaaacctgatccattaactattaggaag
gttttcaacacctttcgtcttattgccaaggaatctggtaaagacagccacgagaagaaa
aagaatcacatcaagggacttcttgttgctgcaactgactgtgaacctcaatatctaatt
cgtctgcttcagtcaaagttgcggattgggtatgctgagcaaactctcttagctgcactg
ggccaagctgcggtatacactgaaggacattctataccacctcctaaagttcagtccccc
ttagaggaggctgcaaagattgttaaacaagtatattcagttcttcctgtgtatgacaaa
ataattcctgcattgcttagtggtggtgtatggaaacttccagagacatgtcactttact
cttggtgttccagttggacctatgttgtctaaagcaactaagggtgtatctgaagttcta
aataaattccaggatgcagagtttacttgtgaatacaaatatgatggagagcgtgcccag
gtacattacatggacaatggatcagttgagatttacagtagaaatgctgaacggaatacg
ggaaagtttcctgatgttgttgctgctatttcaagggtaaagaaatcgtctgtatcatca
tttgttcttgattgtgaacttgttgcatatgaccgggagaaaaagaaaattcttcctttt
caggttctcagtacccgagctcgcaaaaatgtatctatgagtgatattaaagtcgatgta
tgcatatttgcatttgatatcttgtatctcaacggcaagccactacttcaggaaaacctg
aaaattcggagagagcatctctatgcctcttttgaggaagaacctggattttttcagttt
gcaacagcaataacatcaaatgatgttgaggaaatacaaaagtttctcgatgcagctgtt
gatgctagttgtgagggtttaattatcaaaacattgtatgaagacgcgacgtatgaacct
tccaagcggtcactgaactggctaaaactgaagaaagattatcttgaaaatataggggac
tcactggatttggtacctattgctgcatttcatggtcgtggaaaacgtacaggggtctat
ggagcttttctccttgcttgctatgacagcaataatgaagaatttcaaagcatttgtaaa
ataggcacgggattctcagaggcaacacttgaagaacgttctgctagtcttcgtactaaa
gtgattccgaaaccaaagccttattatcgatatgcagagacaatcaatcctgatgtatgg
tttgaagcctctgaggtgtgggaggtgaaagcagcagacttgaccattagccccgttcac
cgtgctgcagtaggcatagtagattcggataagggcatatctcttcgattccctcgtctg
gttcgagttcgggatgacaaagctcctgaacaagcctcatcatctgagatggttgctgaa
atgtattctgctcaaaaacacaatcacccgaacaaccacgatgatgaagaggattga

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