Prosopis cineraria: 129308883
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Entry
129308883 CDS
T09047
Name
(RefSeq) TATA-box-binding protein isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pcin
Prosopis cineraria
Pathway
pcin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129308883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcin03000
]
129308883
03021 Transcription machinery [BR:
pcin03021
]
129308883
Transcription factors [BR:
pcin03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
129308883
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129308883
RNA polymerase III system
TFIIIB
129308883
RNA polymerase I system
SL1/TIF-1B
129308883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
129308883
NCBI-ProteinID:
XP_054806231
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MADQGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEYRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaaggattggaaggcagccaaccagtagatcttaaaaagcacccttctggg
attgtgcctacccttcagaatattgtttcaacagtcaatttggactgtaagttggacctt
aaagcaattgcacttcaggctagaaatgcagagtacaatcccaaacgttttgctgctgtg
attatgaggatcagggagcctaaaacgactgcactcatcttcgcgtctggcaagatggtt
tgtacgggagctaagagtgagcaacagtctaaattggcagcacggaagtatgctcgaatt
atccaaaaacttggtttcccggctaaattcaaggattttaagattcagaacattgttggt
tcttgtgatgtcaagttcccaatacggctcgagggtcttgcatattctcatggtgctttc
tctagttatgaaccagagctgtttccaggactaatttatcggatgaagcaaccaaagata
gtcctgcttatattcgtctctggaaaaattgttctaacgggagcaaaggtgagggatgaa
acttacacagcctttgagaacatttatcctgtgctcactgagtacaggaaaaaccagcaa
tga
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