Prosopis cineraria: 129308972
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Entry
129308972 CDS
T09047
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcin
Prosopis cineraria
Pathway
pcin00040
Pentose and glucuronate interconversions
pcin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129308972
Enzymes [BR:
pcin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129308972
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
129308972
NCBI-ProteinID:
XP_054806302
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MRFLFNLLINEVRSSLKLNPYIKVIILACIFISLLFLLLLCPAFISSSPLQDPELVVKQV
EISANASRRNLGFVSCGTGNPIDDCWRCDPNWHHNRRRLADCAIGFGRHTVGGRDGQTYV
VTDPGDHPMNPKPGTLRYGVIQEEPLWIIFKTDMNIRLEMDLLVNSHKTIDGRGATIHIA
GGPCIKIQRKTNIIIHGLHIHDCVRGNSGFVRVSPRQYRFSSRSDGDGISIFGGTHVWVD
HCYLSRCYDGLIDVVHGSTAITISNNYMTHHEKVMLLGHSDSYEKDRNMQVTVAYNHFGE
GLGGRMPRCRYGYFHVVNNDYSHWKHYAIGGSSNPTIFSQGNRFLAPDDGEHKEVTKHFR
ASDSEWKRWNWKSEGDLMLNGAFFRSSGEEGASSVYSKTVSLAARPSQFVSSITSAAGPL
ACSHGSFC
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttttgtttaatttattaattaatgaagttagatcctcacttaaactgaatcct
tatataaaggtcatcatcctcgcttgcattttcatcagtctgctattcttgcttcttctt
tgccctgctttcatttcttcttccccacttcaagatcctgagcttgtagttaaacaagtt
gaaataagcgccaatgcctcgaggagaaatctagggttcgtttcttgtggaactggcaac
cccattgatgattgctggagatgtgatcccaattggcatcacaatcgccggcgtttggcc
gattgtgctatcggcttcggcagacacactgtcggaggtagggatggccaaacatacgtt
gtcaccgacccgggcgaccaccccatgaaccctaaacccggaactttaagatacggcgtc
atccaagaagaacctttatggatcatcttcaaaacagacatgaacatcaggctcgagatg
gacctcctcgttaattcccacaaaacaatcgacggccgaggagccaccatccacattgct
ggaggaccttgtatcaaaatacaacgcaagaccaacatcatcattcatggcttgcatatt
catgactgtgtacgaggaaattctgggtttgtgagagtatctccccgccagtatcggttt
agttcaaggtcggacggcgacgggatctcgatcttcggcgggacccatgtctgggtggac
cattgttacttgtctaggtgctacgatgggttgattgacgtggttcatggatcgacagcg
atcaccatttcgaacaattacatgacccaccatgaaaaagttatgcttttgggacacagc
gattcgtatgagaaggaccggaatatgcaggtcaccgtcgcgtacaatcatttcggagaa
gggcttggaggaagaatgcctagatgcaggtacggatactttcatgtggtgaacaatgat
tacagccattggaaacattatgcaataggagggagctccaatcccaccattttcagccaa
ggcaatagatttcttgctccagatgatggagaacacaaagaggtgacaaaacactttagg
gcatcagatagtgaatggaagagatggaattggaagtcagaaggagatctgatgctgaat
ggcgcattcttcagatcatctggagaagaaggagcttcttctgtttacagtaagactgtg
agtttggccgccagaccttcacagtttgtgagttctattacctcagcagctggccctctc
gcttgctcacatggttctttctgctaa
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