Prosopis cineraria: 129308989
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Entry
129308989 CDS
T09047
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 isoform X1
KO
K28108
shortage in chiasmata 1
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcin03036
]
129308989
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129308989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
129308989
NCBI-ProteinID:
XP_054806317
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MRSRFLNVDYFSLTPSDSRETLTFLYLPVPCLSFPPRSTVQDHLQFRSTLHGSLHIEKLS
IDDALSKFLSGVLPHRIDVDFQNFEAALPSSHNCLSSSSFGIAEARISQEAMAVFEENET
ENRRLLDSGADIEFSDERNTALIGKDESICDMTQFEMPELDLLLGNGCFPEEVVMQILDE
TSEKESNLEMLKSGLSMQFPDELLRSISLVEHINLDYFAGQNSYSSENFMPLPNLPKFGQ
SKFPILEVDEESLGIPTFSRMEENVGSYFDDIGPQNMGETYSVMEHKEILGGMNCNTMDF
LSVYCLSKQSVVLPDMLHEMDFITILETENFPGNPALAGKSQSDMITFQEILFIDENSIQ
TFESFYNSNLMDDPVTSEFIFEKDFNFKDFDELIITNEIALTDDAFKSLPVPVISDYGKM
RSLYVFVEERLSNLKTQPQCTSDSIYLNWDLLEEDKRNFNLYHYFQNMWAKKDLNITDFG
GESFNDRKLVFDLVSLSDALDRCHIEQSEEVQNLLSDCAYQPENHTLWADSSNQLDGGSP
KQGIGEQLAERNAERASLLFKSSSEVSDLDYFLNPQKATARRNCNLAVESSAADVNVLKV
ACTDFNDKYRHTVLQSQGWNIDLHKVLLSSNILALVGNFEKFYWAVLQGETELTQNSSMD
HFQLMKLPKHKLMELHENGKNMAFVVLCAIKRAAWYLCFYGLHPTSLYIDLLCQKLEYLK
LRFSFLQSLIKDENKKIGDKITLAHPALAVFDKILQSNIKQDCMKVLIVTEEVFWWSLKC
LLNSMGLSFNEFHNTHANQPYGYDIVEDIDSKLKNLMNSNCLIVSYKHISPFFPFNKFGI
ILEYGGPIGSSRISNLSPNSPGLPHLHFLKVELDVHSAVKALCEGVEMPLAAEMSMENEI
HNTINHSKTMMNPKLEKLLKFCPLGKSCDIRSSEMADDVECFAPPLSSRNPEQSHQSMKS
FPETLIIVNTQNVGKEMIVSRRSTYQAILAMEKRGIQVVERDLDLPADIIISSSICLVWY
DSKSLWKKAAPVTEASSSLPLCIENIATNILTLLSFSCDGCFLVFEGEVNFISTIMESSD
GLYAAAASLGIDLQTLFSYSPEFTNEIIVSCINYATKLTRGLYPKMADSLTLAESFLTKF
PSINSLVAHAILSTGATLTEFLGWSHEHRINVLERYHVPEESISLFSALCKYGEREDSKS
IMTDCSSSVSSGPDSDKCHLYQVDYGRKRKKHIGSSEEFEPFSDELLQFEPLQETDAFLD
SSNISKPCIPGKSNYVGRFTDLTKKGFSEITTMKTPSKVSQPSCDSCSHKAPLILEQKKQ
PSFSFEDEGLVPNDKLDTARMSKNLTWRDHSFSEKLDEDVTGEVVDLTEEAPLNKKFSFV
ADSENFPGANFMNFPDLMSEIEQEQIQNNIRRRLSFGKLSQPEFKSNIWKPSNHTRGEVE
NIPEPVFGMDVSTLNAKHSERMSDEDLAPASKRNLQGSPFQKEMSHLGGTPLSRALHSAS
PLKNSPWTIEFINRIKEKSRLRQKALSCHKSVSCFGYSGSTSEVVNRRPPPPPPEFFAYQ
GSRTENIPKHKRQKQCVQPLKPAKNGKHSASMLPTWTPNDKRATKTLTFAVKESQSQTKL
VWNEETQGQAKRFRYQTQKSL
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctcgcttccttaatgttgactactttagtctcactccatccgattccagagaa
accctaaccttcctctatctccctgtcccttgcctctcatttcctcctcgctccaccgtc
caagaccacctccagttccgttcgaccctccatggttcccttcacatcgagaaactttcg
atcgatgatgctctctccaaattcctatccggtgtactgccccacagaatcgatgttgat
ttccaaaactttgaggcagcgttgccttcaagtcataattgtttatcatcttccagcttt
ggaattgctgaagctcggatttctcaggaagcaatggctgtattcgaagaaaatgagacg
gagaaccgccgacttttggattcaggagctgatattgaattctcagacgaaaggaacact
gctcttattggaaaggatgagagcatatgtgatatgactcaattcgaaatgcctgagctg
gatttacttctgggaaatggttgcttccctgaggaggtggtgatgcaaatactggatgaa
acttcagagaaagaaagtaatctggaaatgctcaagtctgggctctcaatgcaatttcct
gatgagcttctgcgttcgatatccttagttgaacatattaatttagattactttgcaggg
caaaattcttattcttcagaaaattttatgcctcttccaaatctgccaaaatttggtcaa
agcaaatttcctattctggaagttgatgaggaaagtctgggaattcctacattctcacgt
atggaggaaaatgtgggttcatattttgatgacataggacctcaaaatatgggtgaaaca
tattctgtcatggagcacaaggagattttgggtggcatgaactgtaacacaatggacttt
ctctcagtttactgtctatcaaagcaaagcgtagtattacccgacatgcttcatgaaatg
gactttattactatattggaaactgaaaattttcctgggaatcctgccctggcagggaaa
tcacagtcagatatgattactttccaggaaatcctgtttattgatgagaattcaattcaa
acatttgaaagcttttataactcaaacttgatggatgatccggtaacaagtgaatttatt
tttgagaaggattttaatttcaaggacttcgatgaattgattattactaatgagatagcg
ctaacggatgatgcattcaagtcactacctgtacctgttatctccgattatggaaagatg
agatctctgtatgtattcgttgaagaaaggctttccaatttgaagacacaaccccaatgt
acatctgacagtatatacttgaactgggatttactggaagaagacaaaagaaatttcaat
ctctatcactattttcagaacatgtgggccaagaaagatctaaacatcacagactttggg
ggagaatctttcaatgatagaaaattagtatttgatctggtttctttaagtgatgcccta
gatagatgccacatagaacaaagtgaagaggtgcagaatttgctttctgattgcgcctat
cagcctgagaatcataccttatgggctgattcaagcaatcagttggatggtggctctccg
aagcaaggcattggagagcagttagctgaaagaaatgctgagagggcttcattgttattc
aagtcttcatcggaagtcagcgatcttgattattttttaaaccctcagaaagcaactgct
aggagaaattgtaacttagcagtagagtctagtgctgcagatgttaatgttttaaaggtt
gcctgtactgactttaatgataagtataggcacactgttttacaatctcaaggatggaac
attgatttgcacaaagttctgttgtccagtaacattctggctttagttgggaattttgaa
aaattttattgggctgttttgcagggtgaaacagaactgacacagaactcatccatggat
cattttcaattgatgaaacttccaaaacacaagcttatggaattacatgaaaatggcaaa
aatatggcatttgttgtgttatgtgcaataaaacgggctgcttggtacttgtgtttctat
ggcctacatccaacgagcttgtacatagacttgttatgtcaaaaattggagtacttgaaa
ttaagatttagcttcctccaatccttgattaaggatgaaaataagaagattggtgacaaa
attactctagcacatcctgctctagctgtttttgacaaaattttacagtcaaacatcaaa
caggattgtatgaaggttttgattgtgactgaagaagttttctggtggtctctgaaatgt
cttcttaactccatgggattatcatttaatgaattccataatactcatgcaaatcagcca
tatggttatgacatagttgaggacattgattcaaaattgaagaaccttatgaattccaac
tgcttgatcgtatcatacaagcatatttctccattcttcccattcaacaagttcggcatt
attttggaatatggtggtccaattggctcgtctagaatatccaatctctcaccaaactcc
cctgggttgcctcatcttcactttcttaaggtggaactggatgtccattctgctgtcaaa
gcactttgtgagggtgttgaaatgccattggctgctgaaatgtcaatggaaaatgagatt
cataataccatcaaccatagcaaaacaatgatgaatcccaaattggagaaactattgaag
ttttgtccactggggaaaagctgtgatataagatcttcagagatggcagatgatgtagag
tgttttgcgcccccgctttcttccaggaatcctgaacaaagtcatcaaagcatgaaatct
tttcctgaaacactgatcattgtgaatactcaaaatgtaggtaaagaaatgatagtgtct
agaagaagcacttatcaagccattcttgcaatggagaaacgaggcattcaagttgttgaa
cgtgatttagatttaccagcggatatcattatcagttcatcaatttgcttagtgtggtac
gacagtaaaagcctgtggaagaaagcagctccagtgactgaagcttcttccagcttgcct
ttgtgtattgaaaatattgcaacaaatattctgacactgctgagcttttcctgtgatggc
tgctttttggtttttgagggagaagttaactttatttcaaccataatggaatcctcagat
ggactttatgctgcagcagcaagcctgggaattgatttgcagacattgttctcttactca
cctgagttcacaaatgaaattatagtaagctgcatcaattatgctaccaaattgacaagg
ggtctgtatcctaaaatggctgattcactaacactcgctgagtcatttttaacgaaattt
ccttctataaattctttggtagcacatgccatactgtctacaggggccacactaaccgag
tttcttgggtggtcacatgaacataggataaatgttttggaaaggtatcatgttcctgaa
gaaagcatttctctatttagtgctctctgcaaatatggggagcgggaggattcaaaatct
ataatgacagactgctcctcttccgtatcttctggcccagattcagataaatgtcatttg
tatcaagtcgattatggaagaaaaaggaaaaaacacataggaagctccgaagaatttgaa
cccttttcagatgaattattgcagtttgagccactacaagaaactgatgcgttcctagat
tcttctaatatttcgaaaccttgtatccctggtaaatcaaattacgttggaagattcact
gacttaacaaagaaaggattcagtgagattaccacaatgaaaactccttccaaagtatcc
cagccatcctgtgattcttgtagccacaaagctcctctaatattggaacagaaaaaacaa
ccatctttttctttcgaagatgaagggttggttccgaatgataaactggacactgctagg
atgagcaaaaatttgacctggcgtgaccacagtttttctgagaagctggatgaggacgtt
acaggcgaggttgttgacttaactgaggaggccccactaaataaaaaattctcttttgtt
gctgactcagagaattttcctggcgccaacttcatgaatttcccagatttgatgtctgag
atagagcaagaacagatacagaataatatcaggagaagattgtcatttggtaagttgagt
cagccagagtttaaaagtaatatctggaagccttcgaatcatacacgaggggaagttgag
aatatcccagaaccagtttttgggatggacgtctctactcttaatgccaaacacagtgaa
aggatgtctgacgaggatttggctccggcatcaaagagaaacctccaaggatcgcccttt
caaaaggagatgtcacatttgggtggaactccactttcacgtgctcttcattcagctagt
ccattaaaaaattcaccttggacaatagaatttatcaatagaatcaaagaaaagagcaga
ttgcgtcaaaaagcattatcatgtcacaagtctgtctcttgttttgggtactcaggcagt
acgtcggaagttgttaatagaagacctcctcctcctcctcctgagtttttcgcatatcaa
ggtagtagaactgaaaatattcccaaacataagagacagaagcaatgtgtacaacctttg
aagccagccaagaatgggaaacattctgcctcaatgctccctacatggacacctaatgat
aagagagcaacaaagacgttgacttttgcagtgaaggaaagtcaaagtcaaactaagttg
gtttggaatgaggaaactcaaggtcaggccaagaggtttcggtatcagacacaaaagtcg
ctctag
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integrated database retrieval system
