Prosopis cineraria: 129309266
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Entry
129309266 CDS
T09047
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129309266
03009 Ribosome biogenesis [BR:
pcin03009
]
129309266
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129309266
Spliceosome [BR:
pcin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129309266
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
90S particles
Helicases
129309266
Pre-60S particles
129309266
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129309266
NCBI-ProteinID:
XP_054806730
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MAEPEEKCHALLEERKKRKRKRNRPLKSTIEEQLEPQESCQNGEEEGEEARENDGDKESA
ELHKNKKDRKVKRSEEASEGEKGSDEDGDEEDKKRKLKNAGSGIMSTVSFDSLGLSEPTF
KAIKDMGFEHTTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPAVELLYHAQFSPRNG
TGVVVICPTRELAIQTHAVAKELLKYHSQTLALVIGGSARKGEAERIVKGVNLLVATPGR
LLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKV
EDLARLSFQTTPIYVDVDDGRTKVTNEGLQQGYVLVPCAKRFVVLYSFLKRYHLKKKMMV
FFSSCNSVKFHADLLNYIQIDCFNIHGKQKQQTRTTTFFNFCKAEKGILLCTDVAARGLD
IPDVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKE
YLFDEKKLANVQSHLEKLVGNNYYLNKAAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVA
ASFCFSNPPKVSLGIDSGASKHRKKLRKIEGSRHGFSDSNPYGKKIAADDNRQFVRH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctgaagagaagtgtcatgccttgcttgaggaacggaagaagaggaagagg
aagaggaatagaccactgaaatctacaattgaggagcaattagaacctcaagagtcatgc
cagaatggggaggaagaaggcgaagaagcccgagagaatgatggggataaggaatctgct
gagctgcataagaacaagaaggatagaaaggtgaagcgcagtgaagaagcaagtgaaggg
gaaaagggcagcgatgaggacggtgatgaggaagacaaaaaaaggaagttaaagaatgct
gggtctggaattatgagcactgtgtcgtttgattctctgggattgtctgaacctactttc
aaggccattaaagatatgggattcgagcatacaactcagattcaagcgagagcaatcccg
ccccttttgattgggaaagatgttcttggtgctgcgaggacgggttctggaaaaactctt
gcttttctaataccagctgtggagcttttgtaccatgctcaattcagtcctcgaaatgga
actggtgttgttgtcatatgccctactagggagcttgcaatacagacacatgctgtcgca
aaagaacttctcaagtatcattcccagacacttgcattggttatcggaggttcggctaga
aaaggagaagctgaacgaattgttaaaggggttaatctcctggtggcaactcctggtcgt
cttcttgatcatcttcaaaatacaaaaggatttatatataagaacttgaagtgcctcatg
attgatgaagctgacaggatattggaagcaaactttgaggaggaaatgaagcagattatc
aaaatcttaccaaagaataggcaaacagctttgttttcggccacccaaacaaagaaggtt
gaggatcttgcccgcttgtcatttcagacaactcctatctatgttgatgtggatgatggg
agaaccaaggtcacaaatgaaggattgcagcagggctacgttcttgttccctgtgccaag
cgttttgttgttctctattccttcttgaagagatatcacttgaaaaaaaagatgatggtc
tttttctcttcatgcaactctgtgaagtttcatgcggaccttctcaattacatacagatt
gattgctttaatatacatggaaaacaaaagcaacagacacgtacaacaactttctttaac
ttctgcaaagcagaaaagggaattttgctctgtactgatgttgctgcccgtggactcgat
atacctgatgtggactggatcgtgcagtatgatcctcctgatgaacccaaggaatatatc
catagggttggtcgaacagctcgtggggaaggcggcaaaggaaatgctttgcttttcctg
attcctgaagagttgcaatttcttcgctatctaaaggcagcgaaggttcccgtgaaagaa
tatctttttgatgaaaagaagctggcgaatgtacagtctcacctggagaagttggtgggt
aacaattattatttgaacaaggcagctaaagatgcttacagatcatatattctagcatat
aattcacactctatgaaggacatatttaatgttcatcggcttgatttacaggctgtggca
gcttcattctgtttttcaaatccaccaaaggttagtttaggcatagacagcggtgcttcg
aagcataggaagaaattgcgcaagattgaaggaagcagacatggattcagcgacagcaat
ccttatggtaaaaaaattgctgcagatgataaccgccaatttgtgaggcattag
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