Prosopis cineraria: 129309326
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Entry
129309326 CDS
T09047
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129309326
03036 Chromosome and associated proteins [BR:
pcin03036
]
129309326
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
129309326
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129309326
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
129309326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
AAA_16
Mov-10_helical
Helicase_RecD
UvrD_C
DEAD
AAA
ATPase_2
AAA_7
IBV_3A
SLFN-g3_helicase
NCC-H
Motif
Other DBs
NCBI-GeneID:
129309326
NCBI-ProteinID:
XP_054806844
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MSTSDEERSVIGSKAEIGFLDFAEERSVCSYAPNEEDPIVISVPFPFVNDKPQSVYVGHT
AVDVITIKNTTNEPVELWSVHIFASNPEDCFTLSLMEPPSANLNADSIQGFLESFSLEDR
MLQPGEILKVWLSCKTKEMGLHTTIVYIDAGDARIERTVFLLAEDKISQSLASKKPYSKG
RKKEKFVVSAYVAGSRPVRKGNRVYKNRLQTYDIPKEIRDMLESNQIPDAIERGLTRKNY
VSYFKTLIMMEELQLEEDMRTYDMECVTLRRKAHQFLSLEVPGLAERRPSLVHGDYIFAK
LASEHDNDNVPVYQGYVHRVEADEVCLKFDPQFHFFHKDEDLYNVHFAYNRLNMRRLYQA
VEAAENLGNEFLFPHETPRRRRIETSHLVPISGNVNEEQMLAIKKILGCKGAPPYLIHGP
PGTGKTSTIVEAVLQLYKNCRKAHILICAPSNSAADYLLEKLLGQKAVEFREEEIFRLNA
STRPYEEMKPELLRFCYFDECVFKCPPARAIMHYKIVVSTYMSACLLYAEGVIRGHFSHI
FLDEAGQASEPETMIPISHLCKRETVVVVAGDPMQLGPVIYSKEADSNGLGKSYLERLFE
SELYSYGDKNYLTRLIRNYRCHPHILHLPSKLFYEGELIACKDDANSLMLSENFLPNKEF
PVLFFGIQGCDEREGNNPSWFNRIEVSKVTELVKRLMTGGNMKEEDIGIITPYRQQVLKI
KQTLESIDLPEIKVGSVEQFQGQERRVIIISTVRSTIKHNDFDRLYCLGFLSNHRRFNVA
ITRAISLLVIIGNPHIISRDYYWHRLLWHCVENSSYLGCSLPERLEVQEDSGFKNFQENS
LPSEDVAWDQDSPQSELPKPAGADEDDWSDGWK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttcagatgaagaacgctcggtaataggaagcaaggcggaaattgggtttcta
gattttgcagaagagagatctgtctgtagttatgctcctaatgaggaggaccccattgtc
atatctgtcccatttccgtttgtgaatgacaaaccacaatcagtatatgtaggccatact
gctgtagatgtaataacaatcaagaacaccaccaatgaaccagtggaactgtggagtgtt
catatttttgcttcaaatcctgaggactgtttcacactttctctgatggaacctccatct
gcaaatttaaatgcagatagcattcaaggttttctagagtctttctctttggaggacagg
atgcttcaacctggtgagattttgaaagtgtggttgtcttgcaaaacaaaggaaatggga
ttgcacacgacaattgtgtatattgatgcaggggatgcaagaatagaaaggacggttttt
ctcttagctgaagacaaaatctcccaatctttggcttccaaaaagccttattcaaaagga
agaaagaaagaaaaatttgttgtaagtgcttatgttgctggctcacgtcctgtgaggaag
ggaaatcgtgtatacaagaataggcttcagacatatgacattcccaaggaaataagagac
atgctggagagcaatcagatccctgatgccattgaaagaggtcttacaaggaagaattat
gtatcttatttcaaaacattaattatgatggaagaactacaattggaggaagacatgagg
acctatgatatggaatgtgtaactttgagaagaaaggcgcatcaattcttgtcactggag
gttccagggctggctgagaggaggccatcactggttcatggggattatatttttgccaag
ctggcctctgaacatgataatgataacgtacctgtttaccagggttatgttcaccgtgtt
gaggctgatgaagtatgtttgaagtttgatcctcaatttcattttttccacaaagatgaa
gatctatacaacgttcacttcgcctataataggctcaatatgagacggttatatcaggca
gttgaggctgcagaaaacctaggaaatgaattcttatttccacatgagacgcctagaagg
aggcgcattgaaacctctcatttggtgcctatttctggtaatgttaatgaggagcagatg
cttgcaatcaagaagattcttggatgcaaaggtgcacctccttatctgattcatggtcct
cctggtacaggaaagactagtaccatagtagaagcagtcctccaactctacaaaaattgt
aggaaagctcatattctcatctgtgcaccctcaaatagtgctgcagactacctacttgag
aaactccttggtcaaaaggctgtcgaatttcgagaggaggaaatatttaggcttaatgca
tctacgaggccttatgaggagatgaaacctgagcttttgcgcttctgctactttgatgag
tgtgtgttcaaatgtcctccagccagagctatcatgcattataagatcgtagtatcaact
tatatgagtgcttgtcttctttatgctgaaggtgtcatccgaggccacttttcacacatt
ttcttggacgaggctggccaggcttcagaaccagaaaccatgatcccaatatctcatctc
tgcaaaagggagactgttgtcgttgtagctggagacccgatgcagttgggtccggtaata
tattccaaggaagcagacagcaacggattggggaaatcatacttggaaagattgtttgaa
agtgaattatattcatatggagataagaactatttaaccagattgattagaaactatagg
tgtcacccgcatatattacatctcccttccaagctgttttacgaaggagaattgattgca
tgtaaggatgatgctaattctttgatgctgagtgaaaacttcctccctaataaagagttc
cctgttctcttcttcggcatccaaggatgtgatgaaagagaagggaataatccatcatgg
ttcaacagaattgaagtgagtaaggtcacagaattagtcaagaggcttatgaccggtgga
aatatgaaggaggaagacattgggattataacaccgtataggcaacaagtactcaaaata
aagcagacacttgaaagtatagatttgccagagattaaggttggaagtgttgagcagttt
cagggacaggagagacgagttattataatatcgaccgttcgctcaacaatcaaacataat
gactttgacaggttatactgtttaggattcttgagcaatcatcggagatttaatgttgca
ataacacgtgccatatcgcttctggttattattgggaaccctcacataatctctcgggat
tactattggcacagactcttgtggcattgtgtggagaattcatcttatctggggtgttct
cttcctgaaagactggaggttcaggaggactctggcttcaaaaattttcaagaaaactca
ttgccctctgaagatgtggcatgggatcaggattcacctcaatctgagttgcccaaacca
gctggtgcagatgaagatgattggtctgatggttggaagtag
DBGET
integrated database retrieval system
