Prosopis cineraria: 129309384
Help
Entry
129309384 CDS
T09047
Name
(RefSeq) uncharacterized protein LOC129309384 isoform X1
KO
K19026
spatacsin
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129309384
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129309384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
129309384
NCBI-ProteinID:
XP_054806923
LinkDB
All DBs
Position
Unknown
AA seq
3220 aa
AA seq
DB search
MELSMGRQDPAILQLHKWGSSEAQLNLSEFREAFLSPTRQILLLLSYQHEALLLPLITGD
SDGSDSKSSHDHHSNHSSGLSTNFLRESTRPSRSGFVNDMPCTSGSEIQFDCVPAETECS
RSDSHPFISDVNSFAWGLCGESYDQHSDASFRELLFVSGRCGVTVHAFSKLNKLGGMVQA
ALEDHFGQGRWVEWGPLCLLTQNMKVDESCSLGHEFSRAQDVDGTGRDGEMPHNHCEIVR
DDDRGSTAKKWLKSFFIGVKTTVCDGTAWTRFPESKEFPSSAEVISFNIFDFNQPQDFCY
NEKHAQNTENSLEDKSDHQSLHLCGADTASVVLSSFFGVKINRCYKCLNVFSSASYHLVG
FFLTPTDSMSVNTGDANEREKCRNLLLVARLDSRGIHWVSLVKLDERINIDLAMEWTDFQ
FSDNLLVCLNSSGLIGLYDAMSGEFVTHFNVAQACGLHPHSDLRGVEKFPLTSDVEVKQV
CDVKVKLSVLHSDPSRRSFKRLVVASHTSLLAVVDVNGVIYVICIGDYMPKTNSSYETLL
PYGQQSGLGILLNWGVCGSDIGHQMKNSNFSSHCHANKAVGNVLQNIGDSTFQGMGDLYD
SYSSGFSAVSKVSDNRKHCASEVESHIMRKIFLPNFRSSEDYSICFSPLGITFLTKKQNV
KNGKSSRLVHFNLLVKSAIYDDNCLNSGYDLYQLNGMEEITIGEALGCAFQGCFYIVRED
GLSVYLPSLSLSSNSLPIEFIGYHQSNKNTMISCKVKGNVEMNEAVVRCCPWKIEILDRV
LLYESTEEADRLCLENGWDIKIARIRQLQIALDYLTFDEIERSLEMLVDVNIADEGIVRL
LFAAVHLMLNKSGNDSETSAASRLLALASCFATKMLRKYGLLQHKRDSFMMEGFNQTGLL
CLPPIEPYNLRTEVDFNRKLHEMAHFLEIIRNLQCRLRSTFQSANQGLVDSGDKSTLMSA
DMLQEESPLLFLPSGSMTLDLLNQHERSFPLPASGGDDAGNFALMPMDFKSHMVMEEVSE
ASPFVPLQGITEEKILPVENPKDMMARWKIDNLDLKTVVKDALLSGRLPLAVLQLHLHRS
EDLITDKDPHDTFTEIREIGRAIAYELFLKGEIELAVATLQRLGENIESCLKQLLFGTVS
RSLRAQVAEEMKRYGYLGPYEWKILEEMSLIESLYPSSSFWKTYHCRLNETSVPSNPALP
GENRLFLSHVFGNFTIECGVIDGIVSDSWINTSDTDSTLEADEEDAHVGYWAAAAVWFDA
WDQKTVDRMILGQSFSSDISLLWESELEYHACRNNWKEVSRLLDLMPASVLSAGSLQLNL
DALHPTSSLGLNMKPSNYGSYLCSLEELDSVCMEVSGVQIYKFSPNLCSVWLRMLMQEKL
AKRFIFLKEYWEGTMEIVSLLAHSGFISGRDKRTLEDDCLETSSDKDGTLQALHKVIVHH
CAQYNLPNLLDLYLDQHGLVLDNDSLCSMQESAADCQWARWLLLSRVKGHEYEASLANAR
EIMSRHSVPRSDLSVLELDEIIRTVDDIAEGGGEMAALATLMHAAVPIQSCLNSGSVSRH
SNSSAQCTLENLKPTLQRFPTLGRTLIGACLGEDTMSSLVPRATMALSNYLSWRDEIFFS
TGRDTSLLQMLPCWFPKAVRRLIQLYVQGPMGCQSFSGFPPGETVLNRDIDLFINGDVHT
EISAISWEATIQRHIEEELYNSVFEETGLRLEHHLHRGHALAAFNQILINRVQQLKSGGG
ASASTSGQTNIQSDVQTLLSPLSPSEENLLLPILPFAVMHFEDSMLVASCAFLLELCGLS
ASMLHVDIAALKRISSFYKSSERNDNLRQLSPKGSVFHAISQEGDVTKSLARTLADEYLH
KDSLGISNKAGGPSRRPSRALMLVLHHLEKASIPRVVDGNSCGSWLLSGNGDGSELRSQQ
KSASQHWSLVTNFCRMHLLPLSTKYLAMLARDNDWIGFLSEAQIGGYSYDAVFQVASKEF
SDPRLRLHMLTVLRGMQLKKKASSSCSDTLEKGCETFFPDENIFVPVELFRILAVCEKQK
SPGEVLLMKAKELCWSILAMIASCFPDISPLSCLTVWLEITAARETSSIKVNDIASQIAD
NVGAAVDATNALSAGDRMLTFHYNRQSPKRRRLIAPTSLNSSAFAISNISNTSLGEKVFD
SQGISNEKKKEVEDSVSTNVPSDSDEGPASLSKMVAVLCEQQLFLPLLRAFEMFLPSCPL
LPFIRALQAFCQMRLSEASAHLGSFSLRIKEEPTYLQATVGREGQTGTSWISSTASKAAD
AVLSTCPSPYEKRCLLQLLAATDFGDGGYASAYYRKCYWKINLAEPLLCKNDELQLGNET
LDDASLLYALEKNRHWEQARNWARQLEASGGQLKSAMNHVTESQAESMVTEWREFLWDVP
EERAALWAHCHTLFIRYSFPALQAGLFFLKHAEAVEKDVPAWELHELLLVSLQWLSGMIS
LSNPVCPLHLLREIETKVWLLAVESEIQMKSEGDFAISTRDPVNKNDTNIIDRTASIIAK
MDNHINTMTNRTVEKYESKENNQIAYKNQTADAGLSTAFTGNTKTKRRAKGYLPSRRQPL
ESVDKSADTDDGSGPLSFKNELQLQEENLKVEMSFSRWEERVGAAELERAVLSLLEFGQI
TAAKQVQYKLSPGQIPSEFRLVDAALKLAAISTPPCHVSMSMLDEEVLSVILSYDILRGQ
HNVDPLQILESLVAIFPERNGRGLCKRIIAVIKAANKLGVLFFEAFNKQPIELLQLLSLK
AQESFEEASLLVQTHLMPAASIAQILAESFLKGLLAAHRGGYMDSQKEEEGPAPLLWRFS
DFLKWAELCPSEPEIGHALMRLVITGQEIPHACEVELLILSHHFYKSSACLDGVDVLVAL
AATRVDSYVSEGDFTCLARLITGVGNFYALNFILGILIENGQLDLLLQKYSAAAATNTGT
AEAIRGFRMAVLTSLKHFNPNDLDAFAMSSQVYNHFDMKHETAALLESRAEQSCEQWFHR
YDKDQNGDLLDAMRYFIEAAGVHSSIDAGNKTRRACAQASLLSLQIRMPDFQWLYLSETN
ARRALVEQSRFQEALIVAEAYGLNQPSEWALVLWNLMLRPEVMEEFVAEFVAVLPLPPSM
LIDLARFYRSEVAARGDQSQFSVWLTGGGLPADWAKYLGRSFRCLLKRTRDLRLRVQLST
VATGFGDVINTCMKEMDKVPDSAAPLVLRKGHGGAYLPLM
NT seq
9663 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtccatgggcagacaggatcctgctatacttcagttgcacaaatgggggtcc
tccgaagcccaactcaacctttcagaatttcgtgaagcatttctttctcctacaagacag
atactgcttttgctttcatatcagcatgaagctcttttgcttcctctgattacaggggac
tcagatggcagtgattcaaaaagcagccatgatcatcatagtaatcacagttcaggttta
tcaactaatttcttacgggagtcaacaagacctagtagatcaggttttgtgaatgatatg
ccttgtacatcaggatcagaaattcagtttgactgtgttcctgctgaaactgaatgttca
agatctgatagtcacccttttattagtgatgtgaactcatttgcctggggtctgtgtggg
gaaagctatgatcaacacagtgatgcttcatttagagaacttttatttgtgtctggaaga
tgtggggtgacagtccatgcattttctaaactgaataaattaggaggcatggttcaggct
gcattagaggaccactttgggcaaggcagatgggttgaatgggggcctttatgtttattg
actcaaaacatgaaagtggatgagtcttgcagccttggtcatgaattctctcgagctcag
gatgtagatgggactggtagagatggtgaaatgcctcataatcattgtgaaattgtcagg
gatgatgatcggggctctactgctaaaaaatggctgaaatcattcttcattggagttaaa
actactgtatgtgatggtacagcctggactaggttccctgagagtaaagaatttccttcc
tctgcggaagtgatttccttcaacatatttgatttcaatcaacctcaggacttttgttat
aatgaaaagcatgcccaaaatacagagaattcattagaagataagtctgaccatcaaagc
ttgcatttgtgtggagcagatactgcatctgttgttttgtccagtttctttggtgtcaag
ataaacaggtgctacaaatgcctgaatgtattctccagtgcatcatatcacttggtcgga
ttttttttaacgccaacagattccatgtctgtcaatactggtgatgcaaatgaaagagag
aagtgcagaaatttacttcttgttgccaggcttgacagtaggggcatccattgggtttca
ttggtgaagcttgatgaaagaataaacatagacctggccatggagtggacagatttccag
ttttctgacaatttgcttgtttgtcttaactcttctggcttgattggtctttatgatgca
atgtcaggtgagtttgtgacacattttaatgttgcacaggcttgtgggcttcatcctcat
tctgacttgcgaggggtagaaaagtttcccttaacaagtgatgtagaagttaagcaagta
tgtgatgttaaggttaaattatccgttctgcatagtgatccatctagaagatcattcaaa
aggttagttgttgcttcacatacctcccttttagctgtggttgatgtaaatggtgtgatc
tatgtgatatgcataggtgattatatgccaaaaacgaattcttcatatgagacgttgctt
ccatatggtcagcaatctggactgggaattttgcttaattggggagtctgtggttccgat
ataggtcaccaaatgaaaaactctaatttctcaagccattgtcatgccaataaagctgtt
ggtaatgtgcttcaaaacattggtgactccacctttcaaggaatgggggacttatatgat
tcatattcaagtggcttttctgctgtttctaaagtatctgataatcgcaaacattgtgct
tctgaagtggagtcacatattatgagaaagatcttccttcctaatttcagatccagtgaa
gattattctatttgtttttctcctttgggaattacttttctaactaaaaagcagaatgtg
aagaatggaaaatcttctcggcttgttcattttaatctgctagtgaaatcagctatttat
gatgacaactgcttaaatagtggatatgatttgtaccagctcaatggaatggaagagata
actattggagaagcacttggttgtgcattccaaggctgtttttatattgttagagaagat
ggtctatctgtgtatctcccatcgctttcattgtcgtcaaattcccttcccattgaattc
attggttatcaccagtcaaataagaatacaatgatttcatgtaaagtaaaaggcaatgtg
gaaatgaatgaagcagtagttaggtgttgtccttggaaaattgaaattttggacagggtt
cttctgtatgaaagcactgaagaggcagatcgattgtgtttggaaaatggatgggacata
aaaattgctcgcatccgtcaattacaaatagcattggactacttgacatttgatgaaata
gagagatctttggaaatgcttgtggatgtcaatatcgcagatgaaggtattgtgagattg
ctttttgctgctgtccatcttatgcttaacaaaagtgggaatgatagtgaaacttctgct
gcttcgaggctgcttgcattggcttcttgctttgcaaccaagatgctgcgtaaatatggg
ttgctgcaacataagagagattcattcatgatggaggggtttaaccagactggattactt
tgtcttcccccaattgaaccatataatctacggactgaagtggattttaatcgaaaactt
catgagatggctcatttcttggagataatccgaaatctgcaatgtagacttaggtcaaca
tttcaaagcgccaatcaaggattggttgacagtggggacaaatcaactttgatgagtgca
gacatgttgcaggaggaatctccacttttgtttcttccatcaggttcaatgacattggat
ttgttgaaccaacatgaacgttcttttcctctacctgcatcaggtggtgatgatgctggg
aattttgctttgatgcccatggattttaagtcacatatggtcatggaagaagttagtgaa
gcatctccttttgttcctttacaaggaatcacagaagagaagattttgccagtggaaaat
ccgaaagatatgatggctcgttggaagattgataatttggacctcaagactgtggttaaa
gatgctcttctctctggtcgtcttcctttggctgttcttcaattgcatcttcatcgttca
gaagatttgatcactgacaaagatcctcatgatacttttactgaaattcgtgaaattggc
agagctattgcttatgaattatttttgaagggtgaaattgaacttgctgttgcaacactc
caaagacttggagagaacattgaatcctgtctcaagcagctgttgtttggcacagtaagt
agatctcttcgagcacaggttgctgaggaaatgaaaagatatggttacttaggaccgtat
gagtggaagattttagaagagatgtcactcattgagagtctctatcccagcagtagcttc
tggaaaacatatcattgccggctgaatgaaaccagtgttccatcaaaccctgctttgcca
ggagaaaatagattattcctctcgcatgtatttggcaattttacaattgagtgtggtgtg
atagatggaattgtgtcggattcatggataaatacgagtgacactgactctactctggaa
gctgatgaagaggatgctcatgttgggtattgggctgctgctgctgtctggtttgatgcc
tgggatcaaaaaactgttgatcgtatgatattgggccaatcgttttcttcggacatttct
ctactatgggaatcagagcttgaataccatgcctgccgcaataattggaaggaagtctct
agattactggacctgatgcctgcatctgttctatctgctgggagccttcagctcaatttg
gatgctttacatcctacgtcatctttaggattgaatatgaagccttctaactatggaagt
tacttatgctctcttgaagaattggattctgtatgcatggaagtttcaggtgtccaaata
tataaattttcacccaatttgtgttctgtgtggttgaggatgctcatgcaggagaagctt
gctaaaagatttatctttctgaaggaatattgggaaggaacaatggagatagtatctctt
ttggctcattcaggcttcatatctggcagagataagaggaccttggaggatgattgtttg
gagacttcgtcagataaagatggaacactacaggctttgcataaagtgattgtacatcat
tgtgcacaatataacttgccaaatcttctggatctttaccttgaccaacatggtttggtc
ctggataatgattcactttgttcaatgcaggaatctgcagctgactgtcaatgggcaaga
tggctactcttgtctagagttaagggacatgaatatgaggcctcacttgccaatgctcgt
gaaataatgtcacgtcattcagttcctagaagtgacctcagtgttctggagctagatgaa
ataattcgtactgttgatgacattgctgaaggagggggagaaatggcagctctggcaacc
ctgatgcatgctgctgttccaattcaaagttgcttgaatagtggtagtgtaagtaggcat
agtaattcctctgcccagtgcactttggagaatcttaagccaactcttcagcggtttccg
acattggggcgcaccctaataggagcatgtcttggagaagacacaatgagttctttggtc
cctagagcaacgatggctttatcaaactatctaagttggcgtgatgaaattttcttctct
actggacgtgatacttcacttctgcagatgcttccgtgctggtttcctaaggccgtgcga
agattgatacaactttatgtccagggtcctatgggatgccaatcattttcaggatttccc
cctggggagactgtgctaaatagagacattgatttatttataaatggtgatgtgcatact
gagataagtgctatctcctgggaagcaactatccaaagacacattgaagaagaactatat
aattctgtatttgaggaaacagggcttcggcttgagcaccacttacatcgtggacatgct
ttggcagctttcaaccagattcttatcaatagagttcagcaactaaagtcaggaggggga
gccagtgcttcaacaagtgggcaaacgaacattcaatctgatgttcagacacttctttca
ccactatcaccgagtgaagagaatctccttttgccaattttgccctttgctgttatgcat
tttgaggattctatgctggttgcttcatgtgcttttcttctggagctatgtggtttgtct
gctagtatgttgcatgttgacattgctgcactaaaacgaatttcttctttctacaagtca
agtgaacgtaatgacaatctcagacaattgtcacctaagggttctgtttttcatgcgata
tcccaagaaggtgatgtaacaaaatctcttgcccgaactctagctgatgaatatttgcac
aaggattctcttggaatttctaataaggctggaggtccaagtagacgaccttctcgagcc
cttatgcttgttctacaccacttggaaaaagcaagcattccaagagtggttgatggaaat
tcctgtgggtcctggcttttgagcggtaatggtgatggatctgagttaaggtctcaacag
aagtctgctagtcagcactggagtttggttacaaatttttgcaggatgcatctgcttcca
ttaagtacaaagtaccttgcaatgcttgctagagataatgactggattggattcttgtct
gaagctcagattggggggtattcatatgatgcagtattccaagtggcatcaaaggaattt
agtgatccacgcctcagacttcatatgttgacagttttgagaggaatgcagttaaagaaa
aaggcaagttcttcatgctcagatactctggagaaaggatgtgagacattctttcctgat
gaaaacatatttgttcctgtggagctcttccgaatactggcagtgtgtgaaaagcaaaaa
agtcctggagaggttctcttgatgaaagcaaaagaactctgctggtctatattggcaatg
attgcttcatgcttccctgatatctctccattgtcatgcctgactgtttggttggaaatt
accgcagcaagagaaacttcttctatcaaggtgaacgatattgcttctcagattgcagat
aatgttggtgctgctgtagatgcaactaatgccctgtcggcaggggatagaatgcttaca
tttcactataacaggcagagtcctaaacgtcgacggttaatagcacctacttcactaaat
tcctcggcttttgcaatttctaacatctcaaatacttctttgggtgaaaaagtattcgat
tcccaaggtatatcaaatgagaaaaagaaagaagtggaagattctgtatccaccaatgtt
ccaagtgattctgatgaaggccctgcatctctttctaagatggttgctgtgctttgtgaa
caacagctatttttacctttgctaagggcatttgagatgttccttccatcatgtcccctg
ttgccgttcattcgtgctcttcaggcattttgtcaaatgcgtctatctgaagcttcagca
catttgggctccttctctctcaggattaaggaagaaccgacatacttacaggctactgta
ggaagagaagggcaaactgggacatcatggatcagttctactgcttcaaaagctgctgat
gctgtgctttcaacttgcccgtctccttatgaaaaaagatgcttactgcaacttcttgct
gctactgactttggggatggtggatatgcatcggcatactatagaaaatgctattggaaa
attaatctagcagagcctttactctgtaagaatgatgagctgcaattaggaaatgaaact
ttagatgatgcttcactcttgtatgcactagaaaagaataggcactgggagcaggcgagg
aactgggccagacaattggaggccagtggtggacaattaaaatctgctatgaatcatgtt
actgaatctcaggctgaatctatggtaactgaatggagggagttcctttgggatgtgcca
gaggagagagctgctctgtgggcccactgccacacactattcatcagatattccttccct
gctcttcaagcggggttatttttccttaaacatgcagaagctgttgagaaagatgttcca
gcatgggagcttcatgaacttttgttggtttctttgcaatggctcagtgggatgataagc
ctatctaacccagtctgtccgttgcaccttctgcgtgaaattgagacgaaagtatggctc
ttagcagttgagtcggagattcagatgaagagtgaaggagacttcgccatttccaccagg
gaccctgttaacaagaatgataccaatattattgaccgaactgcaagtataattgcaaag
atggacaatcatataaatacaatgacgaatagaactgtagaaaaatatgagtccaaagaa
aataaccaaattgcttacaagaaccaaacagctgatgctgggttgtcaactgcttttact
ggaaatacaaagacaaaaagaagggcaaaaggatacctgccatcaagacgccaacctctg
gaatcagtggataaatcagcagatactgatgatggttctggtcctttgagttttaaaaat
gagttgcagttgcaagaagagaacttaaaggtggaaatgtctttttctaggtgggaggaa
agggttggagcagcagagctggaaagggctgtgctttcattgttggaatttgggcaaata
actgctgccaagcaagtgcagtataagttgtctccaggacaaataccatctgaatttaga
cttgtcgatgcagccttgaagcttgccgctatctcaactcctccttgccatgtatccatg
tcaatgcttgatgaagaagtgctttctgttatactgtcatatgatatactgagaggccag
cataatgttgacccactgcagattttggagagtttggtggccatttttcctgaaagaaat
ggacgagggctatgtaagagaataatagcagttataaaagctgcaaacaagttgggcgtc
ttgttttttgaggcattcaacaagcaaccaattgaactactacagctgctttctcttaaa
gcacaagagtcctttgaggaggcaagcctcttagtgcagactcatttaatgccagctgca
agtattgctcagatactggcagaatctttcctaaagggattgctggctgcccatcgtgga
ggctatatggattctcaaaaggaagaggaagggccagctccccttctgtggaggttttca
gatttcttgaaatgggctgaactttgcccctctgaacctgaaattgggcatgctttaatg
cgcttggtgattactggacaagaaattccacatgcgtgtgaggttgagcttcttattctg
tctcaccacttttacaaatcatccgcttgcctggatggagttgatgtccttgtagccctt
gctgcaaccagggttgactcttatgtgtcggagggtgattttacatgtttggctcgcttg
ataactggagttggaaatttttatgctcttaattttattcttggtattctcatagaaaat
ggtcaattggatcttcttcttcagaagtattctgctgctgcagccacaaatacgggcacc
gctgaggctatcagaggatttagaatggctgttcttacatctctgaagcatttcaaccct
aatgaccttgatgcatttgctatgtcctcacaggtgtacaaccattttgacatgaagcat
gagacggccgctcttttagagtcacgtgcagagcaatcatgtgaacaatggttccatcgc
tacgacaaggaccagaatggagacttactggatgctatgcggtatttcattgaagctgcc
ggagttcattcttccattgatgctggcaataaaacacgtagggcttgtgctcaggcttcc
ctcttgtctcttcaaattcgaatgccggattttcagtggctttatctgtcagaaacaaat
gctaggagagcattggttgagcaatctcgatttcaggaggctttaattgtagctgaagct
tatggccttaaccagccaagcgagtgggcattggtactctggaacctgatgctcagacct
gaagtaatggaagagtttgtggctgaatttgtcgctgttctacctcttccaccgtctatg
ctaattgatttagctagattctacagatctgaagtggctgccagaggggaccaatctcaa
ttctcagtttggctcacaggaggagggttgcctgctgattgggccaagtatttaggaaga
tcattccggtgcttactgaagcggacgagggatttaaggttgcgggtgcagttgagtaca
gtggcaactggatttggggatgtcattaatacatgcatgaaggaaatggataaggtgcct
gacagtgcagcgccattagtgctgaggaaaggtcatggtggagcttaccttcctttaatg
tga
DBGET
integrated database retrieval system
