Prosopis cineraria: 129309937
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Entry
129309937 CDS
T09047
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129309937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129309937
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129309937
Complex C
U5 SnRNP specific factors
129309937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
HAT_Syf1_CNRKL1_C
ubiquitin
PMC2NT
Motif
Other DBs
NCBI-GeneID:
129309937
NCBI-ProteinID:
XP_054807699
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MVFIVPPNHKTLSLDVDPKTTSLHALKLAIQHISDIPTSRQRLFLSQSLRLLGNNDSVLI
SDLGIRPYSTLTLHVPLLGGTQPPVPPKPRLDFLNSKPPPNYVAGLGRGATGFTTRSDIG
PARAAPDLPDRSATTIGGAAPAAGRGGGKGGEDEEDDEGDDKGYDENQKFDEFEGNDVGL
FASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQFADLKRK
LYTISAQEWDSIPEIGDYSLRNKKKKFESFVPVPDTLLEKARQEQEHVTALDPKSRAAGG
TETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSMKITSDAE
ISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIQRGCEECPKNEDVWL
EACRLANPEDAKAVIAKGVKSIPNSVKLWMQAAKLEHDDVNKSRVLRKGLEHIPDSVRLW
KAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDNARKVLNRARERLPKEPAIW
ITAAKLEEANGNTSMVGKIIERGIRALQREGLTIDREAWMKEAEAAERAGSVATCQAIIR
NTIAIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQLEKSH
GTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLA
AFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIDEERRLLDEGLKLFPS
FFKLWLMLGQLEERLAQASKQHEKHEEQLEHLKEAKKIYESGLKNCPNCIPLWLSLAKLE
EEMNGLSKARAVLTMARKKNPQNPELWLAAVRAELKHGNKKEADILMAKALQECPNSGIL
WAMSIEMVPRPQRKSKSMDALKKCDHDPHVIAAVAKLFWHDRKVDKARTWLNRAVTLAPD
IGDFWAWYYKFELQHGTEENQKEALKRCVAAEPKHGEKWQSIAKAVENSHQPTEAILKKV
VVLLGKEENAAENDTKH
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcattgtgccgcccaaccacaaaactctatccctcgatgttgacccgaagacg
acctccctccatgccttaaagctcgctatccagcatatttccgacatacccacatcccgc
caacgtttattcctttctcagagtctccgattgctcggcaataatgattctgttcttatc
tccgatctcggaattcgaccttactccactttaactcttcacgttcccttacttggtggc
actcaacctcccgtccctcccaaacctcgacttgatttccttaactccaagcctccccct
aattatgttgctggtcttggacgtggggccactggattcaccacccgttctgatataggg
cctgcccgtgcggcccctgatctacccgataggtcggcgaccaccattggaggtgctgcc
cctgcggctggcaggggagggggaaagggaggtgaagacgaggaagatgatgaaggggat
gataaagggtacgatgagaatcaaaagtttgatgagtttgaagggaatgatgtggggttg
tttgcttccgctgagtacgatgaggatgataaggaggccgatgctgtgtgggaagccatt
gacaagagaatggattcaaggaggaaggatagaagagaagcaaggttgaagcaggagatt
gagaagtatcgggcgtccaaccccaagattactgagcagtttgcggatttgaaacgtaaa
ttgtataccatatctgcacaagagtgggatagtataccggagattggggattattctttg
aggaataagaagaagaaattcgagagttttgtcccggtgcctgatacgcttcttgagaag
gcgaggcaggagcaagaacatgttactgcattggatcccaagagccgagcagctgggggt
accgaaactccatgggcacaaacaccagttacagatttaactgcggttggtgagggtaga
ggcactgtgttgtctttgaagttggatagactctcagattcagtttcagggttgacagtt
gtggatccgaaggggtatctgactgatcttaagagtatgaaaataacaagtgatgcagaa
atttcggatatcaagaaggctaggttgctacttaagagtgttacacagacaaatcctaaa
caccctcctggttggattgctgctgcaaggttggaagaagtagctggcaagattcaggca
gcaaggcagttgattcagagaggttgtgaggagtgtcccaagaatgaagatgtgtggttg
gaggcttgtaggctggcaaatccagaagatgccaaggctgttattgctaagggtgtgaaa
tcgatccctaattcggtgaagctgtggatgcaagctgcaaaattggaacatgatgatgtg
aacaagagtagggtattgaggaaggggttagagcacattcctgattctgttaggttgtgg
aaggcagttgtggagcttgctaatgaagaagatgcaaggctcttgcttcacagagctgtg
gaatgttgtccattgcatgtggaattgtggctagcgcttgcaaggttggaaacttatgat
aatgctaggaaggttcttaatagggcaagagagaggttaccaaaggagccagccatatgg
ataacagctgcaaagttagaagaagctaatggcaatacttccatggttggtaaaattatt
gaaagaggtataagggctttgcaaagagaaggtttgactattgatagggaagcttggatg
aaggaagcagaggctgcagaacgtgcagggtcagttgcaacttgccaggctataattcga
aatacaattgcaattggagtggaagaagaagatagaaagaggacatgggttgctgatgcg
gaagagtgcaagaaaaggggttctattgagacagcgagagctatatatgctcatgccctt
actgtcttcttaactaagaagagcatatggctcaaagcagctcagcttgaaaaaagtcat
ggaaccagggaatcccttgatgctttactgcgcaaagcagttacatacagaccacaggct
gaagttctttggcttatgggtgcgaaagagaaatggcttgctggggatgtgcctgcagct
cgtgcaatcctccaagaagcttatgctgccattcccaattctgaggaaatatggttggct
gctttcaagctggaatttgaaaaccatgaacctgagagagctagaatgctattggccaaa
gctcgtgagagaggaggtacagaaagagtatggatgaagtctgcaattgttgagagagaa
ctgggaaatattgatgaggaaagaaggttgttagatgaagggctgaagcttttcccttca
ttcttcaagttgtggctgatgcttggtcagcttgaggaacgacttgctcaggcttctaaa
cagcatgagaagcatgaggaacaacttgagcacttaaaggaagctaagaaaatttatgag
tctggactcaaaaactgtcctaattgtattcctctatggctctctcttgcgaaacttgaa
gaggagatgaatgggctgagtaaagctcgtgcagttctaaccatggctcggaagaaaaat
cctcagaaccctgaactctggctggctgctgttagagcagaattgaagcatggaaataag
aaggaagctgatattttgatggcaaaagcactgcaagagtgtccaaacagtggtattttg
tgggcaatgtcaattgagatggttcctcgcccccagcgtaaaagtaagagtatggatgcc
ctcaagaaatgtgatcatgatcctcatgtcatagctgctgtggcaaagttattctggcat
gacaggaaggtggacaaagctagaacttggctgaacagggcagtgactctagcacctgat
attggggatttctgggcatggtactacaaatttgaacttcaacatggaactgaagagaac
cagaaggaagcattgaaaaggtgtgttgctgctgaaccaaaacatggtgagaaatggcag
tccatcgcgaaagcagtggagaactctcaccagccaacagaagccattttaaagaaagtt
gtggttttacttgggaaggaagagaatgcggctgagaatgatactaaacattga
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integrated database retrieval system