Prosopis cineraria: 129310640
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Entry
129310640 CDS
T09047
Name
(RefSeq) small RNA degrading nuclease 3-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pcin
Prosopis cineraria
Pathway
pcin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129310640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcin03009
]
129310640
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
Pre-60S particles
RNases
129310640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TACC_C
Lectin_N
Lebercilin
Bap31_Bap29_C
PUMA_CC
HIP1_clath_bdg
DEDDh_C
Spore_GerAC
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
129310640
NCBI-ProteinID:
XP_054808518
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MKEQIDIADTKVLVDIVKLVQKKGMEGKLGNWHNFLLSHDKKFGSCLRDPARRSRETLVA
FLKTFTKQSDLKIFDAIIRRHSNQDLFKLYKGKSDGIPEQRLVQNTLQHPLYPLDYAFGE
VDEDWVVINLSKKNRVLKFTKMIAIDCEMVLCDDGTEAVVSVCVVDRNLKVKLNKRVHPN
KAIADYRTEITGVSPKDLEGVTCSLSKIQKFLRKMLVDGTILVGHSLHNDLRALKLDYVR
VIDTSYIFQYPDDNTHKRPSLNTLCKAVLGYEVREAGAPHNCRDDATAAMKLVLAKIEHG
VDYAIPLPQPLVVESDMAKLLLHKISCRVTTEELRKVVPGDFNLQLGPRKGAIYSAYAIF
KNPQEANKAFESLQGHQEQDSDRRPQKLVEFQLNTGKKASIYVRKMAPDGPSDSKRDLEA
AEIEGKASKKAKMDPEIEGNTPTISNKCETHLNEIEALNQRLKESDLEIESLKQQLKQKE
YEISILNKMVYSLNKKLGK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcagatagacattgcagacactaaggtgctggttgatattgtaaaattggta
caaaaaaaaggaatggagggtaagctgggaaactggcataacttcttactcagtcatgat
aaaaagtttgggtcctgtctgcgtgacccagcaaggaggtcccgtgagacattggttgca
tttctaaagacgtttacaaagcagagcgatttaaagatttttgatgccatcatccgacgc
cattctaatcaagacttatttaagctatacaaaggaaaatctgatggcatccctgagcag
aggcttgtccaaaacactttgcagcacccattgtatccattggattatgcatttggagaa
gttgatgaggactgggttgttataaaccttagtaaaaaaaacagggtgctgaaatttacc
aagatgattgctattgattgtgaaatggttctctgtgacgatggaactgaagcagtagta
agtgtctgtgtggttgaccgcaatttgaaggttaaactaaacaagcgtgttcacccaaac
aaagcaattgctgactacagaacggagattactggtgtctctcctaaagatctcgaaggt
gtcacgtgctcattgtctaagatacagaaattcttgagaaagatgttagtggatggaaca
attttagtgggacatagtttgcataatgatctgcgtgctctgaagctagattatgttagg
gtgattgacacctcatatatcttccaataccccgatgataatactcacaagagaccttct
ttgaatactttatgtaaggctgtgctaggttatgaagttcgggaagcaggtgctccacat
aattgtcgtgatgacgcaacggcagcaatgaaacttgttcttgctaagatagagcatggt
gttgattatgcaattcccttgcctcaaccgcttgttgttgaaagtgatatggctaagctt
cttcttcacaagatatcatgtcgggttactactgaagagctgcgtaaagttgttcctgga
gatttcaatttacagctggggccacgtaaaggggcaatatattctgcctatgccatcttc
aaaaatccacaagaggccaataaggcctttgaaagtctccagggccaccaagaacaggat
tcagatcgacgtccacagaaacttgtcgaattccagctcaatacaggcaagaaagccagt
atttatgttcggaaaatggcaccggatggccccagtgactctaagagagatctagaagcg
gcagaaattgaagggaaagcgtcaaagaaagcaaagatggaccctgaaattgaagggaat
accccgaccatctctaacaagtgcgagacccacttgaatgagattgaagcattaaatcag
cgactgaaagaaagtgatttggagattgaatcgctgaagcaacagttgaaacaaaaggaa
tatgaaatctccatactgaataaaatggtgtactccttgaacaagaaattagggaaatga
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