Prosopis cineraria: 129310782
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Entry
129310782 CDS
T09047
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129310782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129310782
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129310782
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129310782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
129310782
NCBI-ProteinID:
XP_054808671
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MNPDPNNGKQVIVREVWASNLHTELSLIQSAMPSFKFPGTIFTPKVDDKRSYSELSPSTN
YSFMKANVDALNIIQLGLALSDSNGNLPKFGTQNGHIWQFNFSDFDVDRDRHNVEFIQLL
KKQGMDFLRNKKEGVRSGIFRDCVLKSGLFFNSGLTWITFHGTYDFGYLIKLLIGSELPP
NVHMFSHLVAQIFEPKIYDMKHVMKFCNGLYGGLEKVAKTLNVDRVTGKSHQAGSDSLLT
LQAFMKLKDVYFDGNYYSGLERFQGIIYGFEEVNTMMMMIPIIPKRPPSSLLVIPTPTYS
PGLLHPVVFMSRY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagacccgaataatggaaagcaagtgattgttcgtgaagtttgggcttcaaat
ttacatactgaattgtctttgattcaatctgctatgccaagcttcaagtttcctggtaca
attttcactccaaaagttgatgataagcgctcttactcagagctatctccttcaactaat
tacagcttcatgaaagccaacgtcgatgcattaaacatcatccaactaggtcttgcacta
tctgattctaatgggaatttacccaaatttggaactcaaaacggacacatttggcaattc
aatttctctgactttgatgttgaccgagatcgtcacaatgttgagttcattcaattattg
aagaagcaagggatggatttcttgaggaacaagaaagagggtgttcggtctgggattttc
agggattgcgtcctaaaatctggactgtttttcaattctggactcacttggatcacattc
catggaacttatgattttgggtatctgatcaaacttttaattggaagtgaattgccacct
aacgttcacatgtttagtcacttggtggctcagatctttgaacccaaaatttatgacatg
aagcacgtaatgaagttctgcaatggcttatatggtggattagagaaagtggctaagact
ttgaatgtggatcgtgttactgggaagagtcatcaagctgggtctgatagtttgttaact
ctgcaagcgtttatgaaattgaaggatgtttatttcgatggaaattactattctggactt
gaaagatttcaagggatcatctatggttttgaagaagtcaatacaatgatgatgatgata
ccaataattccaaagcggcctccaagttcattattggttattccaacgccaacgtattct
cctggtctacttcatccagtagtgtttatgtctcgttattaa
DBGET
integrated database retrieval system
