Prosopis cineraria: 129311296
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Entry
129311296 CDS
T09047
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129311296
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129311296
Spliceosome [BR:
pcin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129311296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
Ski2_cyano_M
Motif
Other DBs
NCBI-GeneID:
129311296
NCBI-ProteinID:
XP_054809486
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MNMKTQDFLSPLPPLTRATLLIPSSTISLSVSHPLFRLQPQRFSLASSNALKLRVYFKSP
SSFFHSGSQLSDAEQEEDDYEEEDEDDNDDDVAADEYNDVSGDVSDGVVSGDDETDLFGA
KTTRHEVFKWQRVEKLRNEVREFGEEIIDVDELASVYDFRIDKFQRLAIQAFLRGSSVVV
SAPTSSGKTLIAEAAGVATVARGRRIFYTTPLKALSNQKFREFRETFGESYVGLLTGDSA
VNKDAQVLVMTTEILRNMLYQSVGNVSSGSGLFHVDVIVLDEVHYLSDISRGTVWEEIVI
YCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKASLLPLLDE
SGTRMNRKLSLNYLQLQTSRVKSYKDDWTMRRKSRRRGTYTSHDSDDSMSEQRSLSKNDI
NAIRRSQVPQVTDALWYLQERSMLPAIWFIFSRKGCDAAVQYLENCKLLDECETSEVELA
LKRFRIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAG
INMPARTAVISSLSKRSDSGRIQLSSNELLQMAGRAGRRGTDKRGHVVLVQTPYEGAEEC
CKILFSGLQPLVSQFTASYGMVLNLLAGVKAIHRSNESDDTRPSSSGRTLEEAKKLVEQS
FGNYVSSNVMQAAKEELAKIEKEVELLTSEITDEAIDRKSSKSLSQVDYKEISELQEELR
TEKRVRTELRKQMEAKRISSLRPLLEESDSGHLPFLCLEYKDSDGVQHSVPTVFLGKVDS
LNASKLKNMVSSDDSFAVNLVDAGSNNNESDDSDLNGDLGPSYHVALGSDNSWYLFTEKW
IKAVYRTGFPNVALAQGDALPREIMSILLDKDTMKWDKLAHSELGGLWVMEGSLETWSWS
LNVPVLSSFSEDDELLQNSQEYREAIEKYKDQRNKISRLKKKISRTDGFKEYKKIIDKAR
FTEDKIKRLKTRSKRLINRIEQIEPSGWKEFLQVSNVIHETRALDINSHVMFPLGETAAA
IRGENELWLAMVLRNKILLELKPAELAAVSASLVSEGIKLRPWKNNSYIYEPSATVTNII
GFLDEQRSALFQIQEKHGVTISCTLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLL
RRTIDLLAQIPKLPDIDPLLQRNALAAADVMDRPPISELAG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaagacccaggattttctctcacccctacctcctttaactcgtgctactctc
ctcattccgtcctccaccatatctctctcggtctcccatcctctatttcgcttgcaacct
cagaggttctccctcgcatcttccaatgccctcaaactccgagtctacttcaagtcccct
agctcatttttccattccgggtcccagctctccgatgctgagcaagaagaagacgactac
gaagaagaggatgaagacgacaacgatgacgacgtggcagccgatgagtacaacgacgtc
tctggagatgtttctgacggcgtcgtatcaggcgatgacgagactgatctgtttggggcc
aagacgactcggcacgaggtcttcaagtggcagagagtcgagaagctccgaaatgaggtt
agagagttcggcgaggaaattattgacgttgatgagctcgcttcagtttacgatttccga
atcgataaattccagcggctcgcaattcaagcgtttctaagaggttcttcagttgtggtt
tctgcgcctacaagtagcgggaagactttgattgcggaagctgcaggggtggcaactgta
gccagaggaagacggatattctataccactccactcaaggcgttgtccaatcagaagttt
cgcgaattccgggagacttttggcgaaagctatgttggccttcttacgggcgattctgct
gtcaacaaggatgcgcaggttttggtcatgactacagagatattacgcaacatgttatat
cagagcgtgggtaatgtgtcttctggaagcggacttttccatgttgacgtgattgttttg
gacgaggttcattacctcagtgacatatctcgtggtacagtttgggaagagattgttatt
tattgccccaaagaagttcaacttatttgtctgtcagcaactgttgcaaatccagacgaa
ctagctggttggattggtcagattcatggtaaaacagaattagtaacgtcatcaaaacgt
ccagttccattgacctggcatttctccacaaaagcatctttattgccactacttgatgag
agtggaacacgtatgaataggaagctgtcactcaattatttacaactgcaaacatcaagg
gttaaatcttacaaggatgattggactatgagaagaaaatctaggagacgtggaacttac
acaagccatgatagtgatgatagcatgtctgaacaacgttctctttcaaagaatgatata
aatgcaattcgtcgctcacaagttcctcaagtcactgatgcattatggtaccttcaggaa
agaagtatgctgccagctatttggtttatttttagcaggaagggttgtgatgccgctgtg
caataccttgaaaattgcaaactcttagatgagtgtgagactagtgaagttgaactagcc
ttgaagaggttccgcattcaatatcctgatgctgtaagagaaacagcagtgaaagggctt
ctacaaggggttgctgcacatcatgctgggtgtttacctttgtggaaggcattcatagaa
gagttatttcagaggggccttgtcaaggttgtttttgcaacagaaacccttgctgctgga
atcaatatgcctgctagaacagctgtcatttcgtccctcagcaaaaggagtgatagtggg
cgcattcaattaagctcaaacgaattgcttcaaatggctgggcgtgctggacgcaggggc
actgataaacgtggccatgtagtccttgtccaaacgccttatgagggtgctgaagagtgc
tgcaagattctattttctggactacaacctctagtgtcacaatttactgcatcatatgga
atggttttgaatcttctagctggtgtaaaagccattcataggtcaaatgaatcagatgac
acaaggccatcctcatcagggagaactttggaagaggctaagaaactagttgagcagagt
tttggaaattatgtcagtagcaacgttatgcaggctgctaaagaggaacttgctaaaatt
gagaaagaagttgaattactgacatcagagatcactgatgaggccatagataggaaaagt
agcaagtccttatcacaagtggactataaggagatttcagaattacaagaagaattaagg
acagaaaaacgtgttcggactgagttgcgaaaacagatggaagcaaagagaatttcttcc
ctgagacctttattggaagagtctgacagtggacacctaccttttttgtgcttggagtac
aaagattctgatggagtccaacattcagttcctactgtatttctggggaaggttgactct
cttaatgcttcaaagctcaagaacatggtttcttctgatgattcatttgcagtaaattta
gtagatgctgggtctaacaataacgaatctgatgattctgacttgaacggggatcttgga
ccatcgtatcacgtggctcttggttcagataattcctggtatctgtttacggagaagtgg
attaaagctgtatataggacaggctttcctaacgttgcattggcccaaggggatgctttg
cctcgtgaaattatgagtattctccttgacaaggatacaatgaagtgggataagcttgct
cactctgaacttggtggtttatgggtcatggaaggatctctagaaacatggtcttggagt
ttaaatgttcctgttttgagtagtttttctgaagatgatgagctactacaaaattctcaa
gaatatagagaagccattgaaaagtacaaggaccaaagaaataaaatctcgcgcttgaag
aaaaagatatcacgtactgatggctttaaagaatacaagaaaatcatagacaaggccagg
tttaccgaggacaaaattaaacgcttgaagactagatcaaaacgattgattaatcgaata
gagcaaatcgaaccctcaggttggaaggagtttctgcaggtcagcaatgtcatacatgaa
accagggctttggatatcaattcacacgtcatgtttcctctcggtgaaactgctgctgca
attcgaggagaaaatgaactgtggctcgcaatggtccttcgcaataaaatcttattagaa
ctaaagcctgcagaacttgctgcagtgagtgcaagtttggtttctgagggtatcaagctc
agaccctggaaaaacaacagctatatatatgagccttctgcaaccgtaactaatataatt
ggtttcttggatgagcaaagaagcgccctctttcaaattcaggagaaacatggagtaaca
atatcttgcactttagatagccaattttctggtatggttgaggcctgggcttctgggttg
acatggagagaaattatgatggattgtgctatggatgaaggcgatttagctcgcctcctt
cgaaggactattgatctcttagctcagattcccaagttgccagacattgatccattgttg
cagcgcaatgctctcgctgcagctgatgtcatggatcgccctccaatcagtgaacttgct
ggttag
DBGET
integrated database retrieval system
