Prosopis cineraria: 129311538
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Entry
129311538 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129311538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129311538
03110 Chaperones and folding catalysts [BR:
pcin03110
]
129311538
03029 Mitochondrial biogenesis [BR:
pcin03029
]
129311538
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcin04147
]
129311538
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
129311538
Messenger RNA biogenesis [BR:
pcin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
129311538
Chaperones and folding catalysts [BR:
pcin03110
]
Heat shock proteins
HSP60 / Chaperonin
129311538
Mitochondrial biogenesis [BR:
pcin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
129311538
Exosome [BR:
pcin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129311538
Exosomal proteins of other body fluids (saliva and urine)
129311538
Exosomal proteins of breast cancer cells
129311538
Exosomal proteins of colorectal cancer cells
129311538
Exosomal proteins of bladder cancer cells
129311538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
129311538
NCBI-ProteinID:
XP_054809848
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MACSPPPISVFSFANPSFPRAQASRSVFNPRAMAKELYFNHDGSTTKKLLAGVDMVAELL
GVTLGPKGRNVVLPNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGD
GSTTSVVLAHGLITEGIKVIAAGMNPVQVARGIEKTAAALVSELALISRDVEDHELTDVA
AVSAGNDYAVGKLISDALQRVGRRGVVTIENGKSTENSLQVVEGMQFDRGFMSPYFVTDR
RKMIVEFHNCKLLLVDKKVTNPKELFKILDNAVKEKYPIVIVAEGIEQEALAXVIRNKLK
GVLKAAAIKAPAFGERKSHYLDDIATLIGGTVIRDEMGLTLEKASRDVLGSATKVVITNN
STLIVTDGGTGPAVEKRVSQIRKLVENTEESFQKKILNERIARLSGGIAILQVGAQTQVE
LKDKQLRIEDALNATKAAIDEGVVVGGGCSLLRLSKKVDSIKELLDNEEQKIGAEIFRRA
LSYPARLIAKNAGVNGNVVIDKILSNDDVNFGYNAAEDSYEDLMQAGIMDPTKVVRCCLE
HSASVAKAFLTSNAVVIDRKELGPIRRRKPLTTSGLGPIGY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttctccaccccctatttctgtattctccttcgcaaatccatcgtttcccaga
gcccaagcttcacgctctgtttttaacccaagagcaatggccaaagagctttacttcaac
catgatggctcaacaacgaagaagcttctggctggggtggacatggtggcagagcttctc
ggagtcacattaggtcccaagggcagaaatgttgtgcttccgaacaagtatggaccaccc
aagatagttaatgatggagaaactgttctcaaagagattgaattagaagatccactggag
aatgttggagttaaattggtaagacaagctggtgcgaaaacaaatgaccttgctggtgat
ggctctactacatcagttgttcttgctcatggccttatcactgaggggataaaggttata
gcagcggggatgaatcctgttcaagttgctcgtgggattgagaaaacagcggctgctctt
gtttctgaacttgctttgatttccagagatgttgaagatcatgaacttacagatgttgca
gcagttagtgctggtaatgattatgcggtgggaaaattaatctctgatgctcttcaacga
gtaggcaggagaggagtagtgacaattgaaaatggaaagagcactgagaatagcctacag
gttgttgaagggatgcagtttgatcgtggatttatgtctccatattttgtcactgaccga
agaaagatgattgtggagttccacaactgcaagttactattggttgacaaaaaagtcaca
aacccaaaggagttgtttaaaatattggacaatgctgtgaaagagaagtatccaatcgtg
atagttgcagaaggcattgagcaggaagcgctagctnccgtaattagaaataaactcaag
ggtgtgctgaaggcagctgctattaaggctcctgcctttggtgagcgcaagagccactac
ttagatgacattgccaccttgattggaggcactgtaattagagatgagatgggtttgacc
ctagaaaaggctagcagggatgttctaggatctgcgactaaagttgtcataacgaataat
tcaacgttgatagttactgatgggggtactgggcctgctgttgagaagagggtttctcaa
attaggaagcttgttgagaacactgaagaaagtttccaaaagaagatattgaatgaaagg
atagcaagattatctgggggcattgccattcttcaggtaggagcacaaacacaagtagag
ttgaaggataagcaattaagaattgaagatgctctaaatgcaaccaaggcagcgattgac
gaaggtgtcgtagttggtggtggctgtagccttttaaggctgtccaagaaggtggacagt
atcaaagaactcctagacaatgaagaacagaaaattggagctgagatcttcagaagagct
ttgagctatcctgcgagattaatagcaaaaaatgctggtgtaaatggcaatgttgtcatt
gataagattttatcaaacgatgacgtgaattttggctacaatgctgctgaagactcttac
gaagatttaatgcaggctgggataatggacccaacaaaggtagttagatgttgtctggag
cattcagcatctgtggccaaggcttttctgacgtctaatgccgtcgtgatcgatcgcaag
gaattaggtcctatccggcgaagaaagcccttaacaacctcagggttaggaccaattggc
tactga
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