Prosopis cineraria: 129311589
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Entry
129311589 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pcin
Prosopis cineraria
Pathway
pcin04120
Ubiquitin mediated proteolysis
pcin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129311589
04120 Ubiquitin mediated proteolysis
129311589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcin04121
]
129311589
Enzymes [BR:
pcin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129311589
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
U-box type E3
129311589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
129311589
NCBI-ProteinID:
XP_054809907
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MAAAKPQRTPQEVEDIXLRKIFLVSLTDATGNDPRVVYLELTAAEILSEGSDLRLSRDLM
ERVLIDRLCGSFSSAESHFQYLISSYQRAHDEGKKIANMKDKSLRGEMESVVKQAKKLCV
SYCRIHLANPDMFQNGNSSASKHQNSPLLPLILSEVGGTINGFGGSGSAGGVKSPPGFLE
EFFRDSDFDNLDPILKGLYEELRGSVMKVSALGNFQDFLRALLFLVRFPIGAKSLVSHRW
WIPKGVYMNGRAIEMTSILGTFFHISALPDQDLFRSQPDVGQQCFSDASTRRPSDLLSSF
TTIKTVMNNLYDGLSEVLLILLKSTDTRENVLEYLAEVINKNAFRAHMQVDLMTCASSGM
FVNLSAVMLRLCEPFLDANLTKRDKIDAKYVYYSERLDLRGLTALHASSEEVAEWIKSND
GEKRLQQSQEATSSGSNNAGDPSNAIPASHAEKTKYPFICECFFMTARVLNLGLLKAFSD
FKHVVQDLSRCEDSLSTLKDMQPQSSSPQLELDIARLEKEIELYSQEKLCYEAQILRDNT
FIQNALSFYRLMIVWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFASRIPKAL
DGVVLDEFMNFVIMFMASPKFIKNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLE
YLVGNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGV
YLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTTEWERRSAQERQERTRLFHSQENI
IRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPE
KYEFRPKHLLKQIVHIYVHLARGDTNNIFPSAISKDGRSYNDQLFSAAADVLRRIGEDGR
VIHEFVELGAKAKVAASEAMDTEATLGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVI
QRHLLSDNTDPFNRSHLTADMLISNDELKARIEEFVRSRELKKHDKGQGIQSSKGTIQAT
NGEMLID
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaaaaccccagaggactcctcaagaagttgaggatatanatctcaggaaa
atttttctcgtttccctcactgatgccacgggaaacgatccaagagtcgtttacttggaa
ttgacagcagctgagattctcagcgaaggcagcgatttgaggctttcacgggacttgatg
gaacgggttctgattgatcggctttgtgggagtttctcttcagctgaatcgcattttcag
tacttaatcagtagctatcaacgagcacacgatgaggggaagaaaattgcgaacatgaaa
gataaaagtttgaggggtgagatggaatccgtggtgaaacaagcaaagaagctgtgtgta
tcatattgcagaattcatctagcgaatcctgacatgtttcaaaatggaaattctagtgca
agtaaacaccagaactcaccattgttaccccttatcctctctgaggtcggtggcaccatc
aatggcttcggtgggagtggcagtgctggaggagttaaaagcccgcctgggtttctggag
gaatttttcagggactcagactttgataatttggatccaatattgaaaggtttgtacgag
gagttgaggggtagtgtgatgaaagtttcggctcttgggaatttccaagactttttgagg
gcattgctgtttctggttagatttcctattggtgcaaagtctctcgtgagccacaggtgg
tggattcctaaaggagtttacatgaatggacgtgcaattgaaatgactagcattttaggc
actttctttcatattagcgctcttcctgatcaagacttattcaggagccagcctgacgtt
ggacagcagtgcttttcagatgcttctactcgccgtccatctgatttgctatcttcattc
accacaattaaaaccgttatgaataacttatatgatggcctgagtgaggttctcctcatt
cttctgaaaagtacagatactcgtgaaaatgtacttgagtatcttgctgaggtaatcaat
aagaatgcattcagggctcatatgcaggttgatctgatgacctgtgcaagttcaggcatg
tttgtaaatctcagtgctgttatgcttcgcctctgtgagccatttttagatgcaaattta
acaaaaagggataaaattgatgcaaaatatgtctactattcagagcgtctggatttaaga
gggttgactgcccttcatgcatcttccgaggaagttgctgaatggataaagagtaatgat
ggtgagaaacgcttgcaacaatctcaggaagctaccagttctggtagtaacaatgctggt
gatccttcaaatgcaatacctgcatcacatgctgaaaagacaaaatacccatttatttgc
gaatgcttctttatgactgcaagagtgctcaacttaggcctcttgaaagcattttctgac
ttcaaacacgtagttcaggatctttctaggtgtgaagattctctgtcaacactcaaagac
atgcagccacagtcatcgtctcctcagttggagttagatatagctcgacttgagaaagaa
attgagctttactcacaggaaaagctttgttatgaagctcagatattgcgggataacaca
tttattcaaaatgctctttccttctaccgcctgatgattgtttggttggttggcttggtt
gggggatttaagatgcctctaccatcaacttgcccaatggaatttgcttcgatgcctgag
cattttgtagaagatgcaatggaattgctcatatttgcttctcggattccaaaagcctta
gatggggttgttctggatgaattcatgaactttgtaataatgttcatggccagtcctaaa
tttatcaaaaacccatatttgagagcaaagatggttgaagtcttgaattgctggatgccc
cgtaggagtggatcatctgctacagccactctatttgaagggcaccagctgtctcttgag
tatcttgtgggcaatcttttgaagctttacgttgacattgagtttactggttctcacact
cagttttatgacaagtttaacatccgccataatattgccgaactgctagaatacctctgg
caggtccctagtcatcgtaatgcttggagacagattgctaaagaagaggaaaagggtgtc
tatctaaatttcttaaacttcctgatcaatgatagtatttatcttctagatgaaagtttg
aacaaaattcttgagctaaaagaattggaagctgagatgtcgaataccactgaatgggag
cgacgatcagctcaagaaaggcaggagaggacacggctattccactcgcaagaaaatatt
attcgaatagatatgaagttggcaaatgaagatgttagtatgcttgcatttacttcagag
cagattactgctccattcctccttcctgagatggttgaaagagtggccagcatgctcaat
tactttcttctgcaactggtgggtccccaaagaaaatcacttagtctgaaagatcctgaa
aagtatgaattccgtcccaagcatttgcttaagcagattgtgcacatttatgttcatcta
gccagaggtgataccaacaacatcttcccgtctgccatctctaaggatggtcgatcatac
aatgatcagctgtttagtgctgcagcagatgtccttagaagaataggcgaggatggaaga
gttatacatgaatttgttgaactcggtgctaaagcaaaagtcgctgcttctgaggccatg
gatactgaagctactttaggggaaatacctgatgaattcctcgatccaattcagtacact
ttgatgaaagatccagttatcttaccttcttcaaggatcacagttgatcgtcctgtcatt
cagaggcatcttcttagtgataataccgacccattcaaccgttctcatcttaccgccgat
atgctgatttctaatgatgaactcaaggcaagaattgaggagtttgtgaggtcccgggag
ctgaagaaacatgataaaggccaaggtattcagagtagcaagggcacaattcaggccacg
aatggggaaatgttgattgattag
DBGET
integrated database retrieval system
