Prosopis cineraria: 129312022
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Entry
129312022 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SPATULA-like
KO
K28361
transcription factor SPT/ALC
Organism
pcin
Prosopis cineraria
Pathway
pcin04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129312022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcin03000
]
129312022
Transcription factors [BR:
pcin03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
129312022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
CENPU
DUF4450
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
129312022
NCBI-ProteinID:
XP_054810541
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MGDMYGYGKSNVIPSSSSSTSPPDEFSLFLHQILLPPPSSSDAPPLSSLLTHMPENAPNA
SEHENASLSYSSSLLQDVISGVDSASKNRAFLSSYVKGGSAANVSSSSVGVSENETDEYD
YDSEEGTVEAMVPKSFXPRRSSKRSRAAEVHNLSEKRRRSRINEKLKALQNLIPNSNKTD
KASMLDEAIEYLKQLQLQVQMLSVRNGLNLLPTCFAEGLQPLQLSQMRVEYGEEEDGSCP
LNLTTTMPLDNESNLSNKRTVPSPLNIINSETPFGLDSQIIGHLRPFELKASSSEICRED
LYQRKQLNAEDSNTNPMGDSQAVREFESGTLASVSLAFDKQNDRSEELKTCIAGRD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgggggatatgtacggctatggaaagagtaacgttattccctcttcttcgtcttcaacc
tcacctccagacgaattttccctttttctgcatcagattctcctccctcctccctcctcc
tccgacgcaccgccactgtcttccctcctcacccacatgcctgaaaacgcacccaacgct
tccgagcatgaaaatgccagcctttcatactcatcttctcttcttcaagatgtaatctca
ggcgttgattctgcctctaaaaaccgtgcctttctctcatcttacgtgaaggggggttct
gctgcaaatgtgtcgtcctcctcggttggagtaagcgagaatgagactgatgagtatgat
tatgacagtgaggagggtacggttgaagcaatggttccaaagtcattcnctcctaggcgt
tcatcgaagagaagcagagctgcagaagttcataacttgtctgagaagcgaaggaggagt
cggatcaacgaaaagctgaaggctttgcagaatctaattccaaattcaaataagactgac
aaggcttcgatgcttgatgaagctattgagtatcttaaacagcttcagcttcaagtacag
atgctgtctgtaagaaacggattgaatttgcttcctacgtgcttcgctgaaggcttgcag
cctctgcaactgtctcagatgagagttgagtatggcgaagaagaagacgggtcgtgtcct
ttaaacttaactactactatgcctcttgacaatgaatccaatctatctaacaaacgcact
gtgccctctcctttaaatataatcaattcggaaacaccttttgggttggattctcaaatc
atagggcaccttagaccctttgaactcaaagcatcatcttctgagatatgcagggaggac
ttatatcagcgcaaacaattaaatgcagaagattcaaataccaatcctatgggtgattct
caggctgtacgagaatttgagtcaggtacgttggcttcagtatcactcgcctttgataag
caaaacgaccggagtgaagaattgaaaacatgcattgcgggaagagattag
DBGET
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