Prosopis cineraria: 129312335
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Entry
129312335 CDS
T09047
Name
(RefSeq) uncharacterized protein At3g06530 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
pcin
Prosopis cineraria
Pathway
pcin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129312335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcin03009
]
129312335
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129312335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
129312335
NCBI-ProteinID:
XP_054810864
LinkDB
All DBs
Position
Unknown
AA seq
2134 aa
AA seq
DB search
MANSIAAQLEAIKSFVHVDSQPLKRPFTRPSVLFDPKEAADIDIETIWSIGIQGLEVLMS
SDERFQNYKNELFSHRSKELDRELMGMEENNQINVSINSYLRLLSGFFLLPSALKTLEYL
IRRYKVHVYNTDDLILCALPYHDTHAFVRIVQILDTRNTKWAFLDGVKDSGAPPPRSVIV
QQCVCDKGILDVLCDYASPRKKFQPSKHVISFCTAVFFEVLGTPVRLDDDLIKRILPFVV
SGLHLGVKGVLDHRAASFMIIGLLVKKAALAPKLLNSLIRSVAEVACEEAKELTDLQWFR
LSLIVLINLVQSQKIDILPKKAVEILKEIRNLAGMLSELSKEFNCDKFLLVLVDSLIDLC
WSDECSQQALISILEKVLIKNHVDHVVTKILSGCVKLTQKVGDSKFSMPGGWVKKILIVL
NKRYPPELRGAVSQFLQDNTVRSKKDGSVYKILSKMLDGNLDSSLNMSGSKIWLALHHPK
ADVRCATLADLNSSGILKSKEVVSESLVDIQEALLRQLNDKDLTVVRAALSVDGLPDIIS
SSELFDALHNVLRRCIDKLLLGSAENVSLTSDVAISCLKVAISYSHGHTDYIKRIAAMIF
PLLLAMPQTQSLNLKALRLVNEINWPLYQAVAVAPAGELTVSGSLYSINLKTINSMAENL
RICPENHITWFVHNCSDLELSKTLFFLVLFQALILKPSSDNFPAFFENVFPFLKAEWESL
VSPGDFILEEFNSEVLDWDCSLILKFLDSDLKSLNAKLIVCIFWKLLALLILATPSDILQ
DNNDKWVSWIKDLFVCFAASKFKHAFQEHLHYLVAQCKISPPSLLSKFFTEEGVPVEVQI
ESLQCFAFLCSLSQERCQFELLAEFPSVLVPLASDNQGTRIAAMNCIDGLCVLWSHLERS
GKRNGSNATWSHFLGDFLGLIDQQKTLILSDERFLPSMFASLLGSTCHSILVPQNIENRF
DQSTKEKILCFILGSALKLSNYGKLKILSLLKGIGKGIACVKEVVSLFSLLLNRRNQYVN
VLDKSSQKLSSIEIEMLCLLLESCVMSSSSGGNDFEDHLLTALRLDSTTSNHPAFVQPCI
TVLRKLSCQFYRGLKIEVKEHLFHELLFLCRNANGDIQTAAREAVSRIDISFSVFGDMLD
IILKRGSCINISESKKKKKLSVHAEEGIFRRENSFYILSSLLDVLLLKKDITKRHMLINP
LFKLLSKIFSKEWVNDSLFQEKGLAQPSLSETNLNAVCHIQQTLLIILEDIITSLDGSAP
FKENITNEIDLKVLIECAHSSNDAVTRNHVFSLLSAVAKVFPEEVFGHILDIVAVVGEST
VTQIDSHSKHVFEDLISTIVPCWLSKTDDVEALLKIFMDTLPDVVEHKRLSIVLYLLRTL
GEGKSLASLFVLLFHSLVSREQTTFLDIKAPDALTFYAREWEYKLAVQICEQYTSVTWIP
ALVMLLQRLENDPGLFLELFLAMQFTLHKLQDPEFLVKMESGEDADVIQKGLGKLMEQIV
FLLQLVFSKKKQLKFPVILRKELKETMRAAVRNITLVMIPSAYFGSITKLLRHSDKDVGE
RALGLLCETARNHKVVSSKSKESKAQSSNPCFPWFNMNESDQKSFDKMCSEIVWVIDDPA
EGSNTSLKVAAVSALEVLANSLPSNNSIFVLCLRSVARSISLCNLAVASSCLRTTASLIN
VLGPKALAELPHIMENMMKLLSELFSDSDIKAQSMEFVSSASKDSYLLSVLITLEVVVDK
LGGFLNPYLPNIINLLVLHPEYISGMDAKVESRASGLRKLLAERIPVRLALPPLLNVYPA
SINAGDKSLDIMFDMLATFVGTMERSSIVAFHGKIFDLCLLALDLRHQSPVSVHDIDAVE
KSVINAMVALTMKLTESMFKPLFIKSIEWAESDVGASVGSTARAISFYGMVNKLAESHRS
LFVPYFKHLLGSCVCYLSDTGDVKPLSQKKKKAKILDDNGAKGGIVSIKSWHLRKLVLSC
LHKCFLYDTGSSKFLDSSNFQMLLKPIVSQLVIEPPALLDDTPNLPSVKEVDDLLVVCVG
QMAVTAGSDLLWKPLNHEVLMQTRSEKVRARMLGLRIVKYLVENLKEEYLVLLAETIPFL
GELLEDVEPCVKSLAQEILKEMESMSGESLRQYL
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgatagctgcacaattagaagcaatcaaatccttcgtacatgtcgattct
caacctttgaagaggccgtttactaggccttctgttttgtttgatcccaaagaagcggca
gatattgatattgaaaccatatggagtattgggattcaaggtttagaggttctcatgagc
tctgatgagcggttccaaaactataagaatgaattgtttagccacagaagtaaagagttg
gacagagagttgatgggtatggaagaaaacaatcaaattaatgtctcaattaattcttat
ttgaggctactttcgggattttttcttctaccctctgctcttaaaacacttgagtatttg
atacgtagatacaaagttcatgtatataataccgatgacctaattttatgtgctctgcct
taccatgacacacatgcatttgttcgaatagtacagatactcgacacaaggaatactaaa
tgggcgtttcttgatggtgtaaaagactctggtgctcctccacctagaagtgttatagtg
cagcagtgtgtctgcgataagggtattttagatgttctgtgcgactatgcatctccaaga
aagaagtttcaaccttcaaaacatgtgatcagcttttgcactgctgttttctttgaagtt
ttgggtactcctgtgaggcttgatgatgatcttatcaagagaatccttccttttgttgtc
tctggccttcatcttggcgttaaaggagttttagatcacagggccgcgtcttttatgatc
attgggttgctagtaaaaaaagctgcattagctcctaaacttctaaatagcttgatacgt
tcagttgctgaggttgcttgtgaggaggcaaaagagttgactgatctccagtggtttcgt
ttgtcccttattgtcttgatcaacctcgttcagtcacaaaagatcgatattcttccaaag
aaggctgtagaaattttgaaagagataagaaacttggcagggatgctatcagaattgtct
aaagagttcaattgtgataaattccttttagtgcttgtggattccttaattgacttatgt
tggtctgatgaatgttcccagcaggctttgatatctatactagaaaaggtcctgataaag
aatcatgttgatcatgtggttaccaagatcttatcaggttgtgtgaagttaacgcaaaaa
gttggcgattcaaaattttctatgccaggaggatgggtgaagaagattttgattgttctc
aataaaaggtatccgcctgagctacgtggagcagttagtcaattccttcaggataacaca
gttcgttctaagaaagatggatcagtgtacaagattttatccaagatgctggatgggaat
ctagattcatcactcaatatgtcaggttccaaaatttggctggccttacatcatcctaag
gctgatgttcgatgtgctacgttggctgatttaaattcatctggcattctaaaatctaag
gaagttgtttcagagagtctagtagacattcaagaggccttattgagacaactcaatgat
aaagacttaacagttgttcgggcagctttatctgttgatggactgcctgatataataagt
tcttctgaactctttgatgcacttcataatgtgctaagaagatgcattgacaagctacta
ttgggttcagctgaaaatgttagtttaaccagtgatgttgctatcagttgcctcaaagtt
gccatctcatactcccatggtcatactgattatataaagagaatagctgccatgatattt
ccattacttcttgccatgcctcagacacaaagcttgaatttgaaggctttgagactagtc
aatgaaataaactggcctctttatcaggctgttgctgttgcacctgctggagaattgact
gtttctggaagtttatattcaattaacctgaagacaatcaacagcatggctgagaatctt
aggatctgcccagaaaaccatattacttggtttgttcataactgcagtgatttggaattg
tcgaagacgctcttctttttggtgttatttcaggctctaattttaaaaccaagcagtgat
aacttccctgcattttttgaaaatgtatttccttttttaaaggctgagtgggaatcatta
gtgtctcctggcgatttcattttggaagagttcaattctgaagttctggactgggattgc
agcttaattctgaagttcttggattctgatctcaaatctctgaatgcaaaacttattgtt
tgcatattttggaagttgcttgctttgctaatattagcaacaccttctgacattttacag
gataataatgataagtgggtcagctggattaaggatctgtttgtatgttttgctgcctca
aaattcaagcatgcttttcaagaacatctccattacctggtggctcaatgcaagatatca
cctccctccctcttatccaaatttttcacagaggaaggtgtccctgttgaagtccaaatt
gaaagccttcagtgctttgcatttctttgcagcctgtcacaagaaagatgtcaatttgaa
cttctagctgagtttccttcagttcttgttccattggctagtgataaccagggtacaagg
attgcggccatgaactgcattgatgggctatgtgtattgtggtctcatcttgaacgttct
ggaaagagaaatgggagcaatgcaacatggagccattttctgggtgattttttgggtttg
atagatcagcaaaaaacactaatattgtctgatgagagatttcttccttcaatgtttgca
tctttgctgggctcaacctgtcacagcatcttagtaccccaaaatattgaaaacagattt
gatcagtctacaaaagaaaaaattctttgcttcattttgggttctgctttgaaactctca
aactatggcaagctgaagattttatccttgctcaagggaattggaaaaggcattgcatgt
gttaaagaagttgtgtcactgttttccctacttttgaacagacggaatcaatatgttaat
gttctagataagtcctctcagaaattgtcaagcattgaaattgaaatgctatgcctatta
cttgagagctgtgttatgtcctcttcctctggtggaaatgattttgaagatcatttactg
acagctttgcggttggattctactacttccaatcaccctgcctttgtacagccctgtata
accgttctgaggaaacttagttgtcaattctatagggggttgaagattgaagtaaaggag
catttgtttcatgagcttttgtttttgtgccgtaatgctaatggtgatatacaaactgct
gccagagaggctgtatcgcgtatagatattagtttctcagtatttggcgacatgcttgat
atcatacttaaaaggggaagttgcataaatatctcagaatccaagaagaaaaagaaacta
agcgtgcatgcagaggaaggcatatttagaagggagaattctttctatatccttagttct
cttcttgatgttttattactgaagaaagacataacaaagaggcacatgcttataaacccc
ttatttaagcttctgagcaagattttttccaaggagtgggtgaatgattctctcttccag
gagaagggcctggcccaaccttcattaagtgagactaaccttaatgcagtatgtcatatt
caacagactttgttgataatccttgaggatataatcacatctctcgatggcagtgctcca
tttaaggaaaatataacaaatgaaattgacttgaaagtcctgatagagtgtgcccattct
tcgaatgatgcagtcacccgtaaccatgtattttctctgctttctgctgttgctaaagtt
tttcctgaagaagtttttgggcatatacttgatattgttgctgttgttggagaatcaact
gtcacacagattgacagtcattcaaagcatgtttttgaggatcttatatccacgattgtt
ccttgttggctgtctaagactgatgatgtagaagcattactgaagattttcatggataca
ttgcccgatgttgttgagcataaaagattgtcaattgttttatatttgttaagaactttg
ggtgagggtaaaagcttggcttcattgtttgtcctgcttttccattcactagtttcaagg
gaacaaactactttccttgatatcaaggctccagatgcattaacattttatgcaagagag
tgggagtacaaactggctgtgcaaatatgtgaacaatacacaagcgtgacatggattcct
gctttagttatgctgcttcaacgactggaaaatgaccctggactctttctagagttgttt
cttgcaatgcagtttactttgcacaaattgcaagatccagaatttttagtcaagatggaa
tcaggagaagatgcggatgtcattcagaagggacttggaaagcttatggagcagattgtt
tttctcttacaacttgtattttcaaaaaagaaacaactgaagttccctgttattctgaga
aaagagttaaaagaaaccatgcgtgctgctgtgcgaaatattaccttggtcatgatacct
tcagcatactttgggagcataactaagttgctccgccattcagataaagatgttggtgaa
agggctcttgggcttttgtgtgagactgcaagaaatcataaagttgttagttcaaagagt
aaagaaagtaaagctcaaagttcaaatccatgttttccttggtttaatatgaatgagagt
gatcaaaagtcgtttgataagatgtgttctgaaattgtatgggtaattgatgatccagct
gagggttcaaatacatcgttgaaagtggcagcagtttctgcattagaagttttagcgaac
agtttgccttctaataattcaatcttcgttctatgcctcagatctgttgcaagatccatc
agtttgtgcaacttggctgtggcttctagctgccttcgaacaactgcttccttgatcaat
gttctaggtccaaaagctttagcagagcttcctcatataatggaaaatatgatgaagcta
ctttctgaactgttctctgattcagatatcaaagctcaaagtatggagtttgtttcctca
gcctcaaaagactcatatttgttatctgttctcatcactctggaggtagttgtggacaag
cttggtggatttctaaatccttatctgccaaatataataaatcttctggtacttcatcct
gaatatatctctggaatggatgcaaaggtcgaatctagagctagtgggcttcgcaagctc
cttgcagagagaatccctgttcgacttgccctgccaccattgttaaatgtttatcctgct
tctattaatgctggggacaagagcttagatattatgtttgacatgttggcaacctttgtc
ggcaccatggaaaggtcatctattgttgctttccatggaaagatttttgacctttgtctt
cttgcacttgatctgcgtcatcagagtcctgtttctgttcatgatattgacgcagtagaa
aaaagtgtgatcaatgcaatggttgctctgaccatgaaacttactgagagcatgttcaaa
cctctattcataaagagtattgaatgggcagaatctgatgtgggtgcatcagtaggtagc
actgctagggccatatccttctatggcatggtaaataaacttgcagagagccatcggtca
ttgtttgttccttatttcaaacacttgcttggtagctgtgtttgctatcttagcgatact
ggagatgtaaaacctttgagccagaagaaaaagaaggctaagattctggatgataacggt
gcaaagggaggtattgtttctatcaaaagctggcatcttaggaagctagtcttgtcgtgt
ttacacaagtgttttctctatgatactggatcctccaagtttcttgactcttcaaacttt
cagatgctattgaaaccgattgtttcacaactagtcatcgaaccaccagctttgttggat
gacaccccgaatttgcctagtgtgaaggaagttgatgacctactggttgtatgcgttggt
caaatggccgtgactgctggaagtgacctcttgtggaagcccttgaatcatgaggtgttg
atgcagacacggagtgagaaggtgcgagcaagaatgttgggcctaagaatagttaaatat
ttagtggagaatttgaaagaagagtatcttgtattgctggctgaaacaatccccttcctt
ggtgaattgcttgaggatgtggagccttgtgttaaatctcttgctcaggaaattctcaag
gaaatggagtccatgagcggggaaagtctaaggcaatacttgtaa
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