KEGG   Prosopis cineraria: 129312400
Entry
129312400         CDS       T09047                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
pcin  Prosopis cineraria
Pathway
pcin03013  Nucleocytoplasmic transport
pcin03015  mRNA surveillance pathway
pcin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129312400
  09122 Translation
   03013 Nucleocytoplasmic transport
    129312400
   03015 mRNA surveillance pathway
    129312400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcin03019]
    129312400
   03041 Spliceosome [BR:pcin03041]
    129312400
Messenger RNA biogenesis [BR:pcin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     129312400
    TREX complex
     129312400
Spliceosome [BR:pcin03041]
 Complex C
  Other components
   EJC/TREX
    129312400
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129312400
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz RRM_3
Other DBs
NCBI-GeneID: 129312400
NCBI-ProteinID: XP_054810960
LinkDB
Position
Unknown
AA seq 242 aa
MSAALDMTLDDIIKKNKKSGSGNSRGRGRGSGPGPTRRFPNRAANRAAPYTTTKAPEATW
QHDMFADQPVAPLAAQGGRASSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYAIHY
DRSGRSKGTAEVVFSRRVDAVAAVKRYHNVQLDGKPMKIEIVGTNIATPTAAPAANGAVG
NTNGVPRIGQGRGGALGRPRGGGRGRGFQRGRGRGRGRGEKVSAEDLDAELEKYHSEAMQ
IN
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtctgcagctctggatatgacccttgatgatatcatcaagaaaaacaagaaatctgga
tctggtaactccagaggtcgcggccgaggatctggtcctggtcctactcgccgtttcccc
aatcgtgccgccaaccgtgcagctccttacacaactacaaaggcaccggaggcgacatgg
cagcatgatatgtttgcagatcagcccgtggcaccgctcgcagctcaaggtggtcgagcg
tcttctatagaaaccgggactaagctctacatatctaatttggattacggtgtttcgaac
gaggatattaaggagttgttttctgaagttggtgacctaaaacggtatgcaatccattac
gacaggagtggcagatcaaagggcacagcagaagtagtcttttcacgacgggttgatgct
gtagccgctgtgaagagataccacaatgttcaacttgatggtaaaccaatgaagatagag
attgtggggacgaacattgccacacctacggcagctcctgctgccaatggagctgttgga
aatacaaacggtgttcctagaattggccaaggtaggggtggggcacttggaaggccacgt
ggtggaggtagaggacgtggctttcagaggggtcgaggacgtggaagaggtcgtggagag
aaggtttctgcagaagatcttgatgctgagttggagaagtatcattcagaggcaatgcaa
ataaactga

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