Prosopis cineraria: 129312447
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Entry
129312447 CDS
T09047
Name
(RefSeq) uncharacterized protein LOC129312447 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129312447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129312447
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129312447
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129312447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
129312447
NCBI-ProteinID:
XP_054811052
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKTIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKSRPPRLMHLEMSIARHKA
HIKKCELLLRLLDNDELSPEQVNDVKEFLDDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVTIGPPGLAKGALGVSLKTSLAASALQTPELADDAASQDSNSDTVVRTPPSKSSGI
SSAMSTPAGNFATPVSLNVSSQNLSSATATASALPGSNSVRTALENTGAANSSSVNQSTS
VKEDEVNGFPGRRASPSLSDAAHARGISRNSIPNQVTSGIPLASSNIVSGNGALVSVPSG
NGALVSVPSASEITKRNLMGADDRLGSSGIGQPLLSPLSNRMMLPQTVKVNDGTGSVDPN
NVNEAAAVSGRVFSPSGGPGIQWRPGSPFQNQSETGQLRGRTEIAPDQREKFLQKFQQVQ
QQGHSTLLGMPSLSGGSHKQFSAQQQQSPLLQPASGLSSVSSASLQMPSNSILSPSSQQP
MISGASQDSDGNSKVEEHQQQQNAPDDSVSESTANNGLGKNLLNEEDLKSTYAVDSPQAG
MSGSLAEPAQSSRDADFSSGQPLQSNQPSGNLGVIGRRSVVDFGAIGDSLSGTNVNSGGG
RDHLFNLQMLESAYYKLPQPKDSERPRTYTPKHPVITPPSYPQVQAPIVSNPAFWERVGL
DPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGT
YVYFDFHVANDDLQHGWCQRIKTEFTFEYNYLEDELSV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaagcagaaagcttcagggcgagatagatcgcgttctcaagaaggtccaagaa
ggcgtcgaggtcttcgatagtatctggaacaaggtttacgatacggacaatgctaaccag
aaggagaaatttgaggcagacctaaagaaggaaattaagaagctccagaggtacagagac
caaattaagacttggatacagtctagcgagatcaaggataagaaggttagtgcctcttat
gagcaggctctggtggatgctcgcaagaccatcgagcgtgaaatggaaagatttaaggtc
tgtgaaaaggaaactaagaccaaagcgttctccaaagaaggcttgggccaacagcctaaa
actgatccaaaggagaaggctaagtcagagacaagggattggttgaataatgtggttgga
gagttagaatctcaaatcgataacttcgaagctgagcttgaagggctttctgtcaaaaag
ggaaaaagcaggccacctagattgatgcatctagagatgtcaattgcccgacacaaggct
catataaaaaaatgtgagttactcttgaggctgctagacaatgatgaattaagtcctgag
caggttaatgatgtcaaagagtttttggatgactatgtggagcgaaatcaggaggacttt
gatgaattcagtgacgttgatgaactatacagttcattacctttagacaaggtggagtct
cttgaagatcttgtcacaattggtccacctggtcttgctaagggtgcacttggtgttagc
ttgaagacatctttagctgcatcggctttgcaaacacctgaactagctgatgatgctgct
tcccaggatagcaattctgatactgttgtcagaacaccaccttctaaaagtagtggaatc
agttctgccatgtcgacaccagctgggaactttgctactcctgtttctttgaatgtttca
tctcagaacttgtccagtgcaactgccactgcatcagccctccctggttcaaattctgtt
cggactgctctggagaatacaggtgctgctaattcttcgtctgtaaatcagtctacctct
gtgaaggaagatgaggttaatggcttccctggccggagagcatctccatcactttctgat
gccgcacatgcaagaggcatcagtagaaacagcataccaaatcaagtgacgtctggcatc
cctcttgcttccagcaacattgtgtccggcaacggtgcccttgtttcagtcccttccggc
aacggtgcccttgtttcagtcccttcagcctctgaaataacaaagagaaacttaatggga
gctgatgataggcttggaagtagtggaatagggcagcctcttctatcacccttaagtaat
agaatgatgttgcctcagactgtgaaggttaatgatggaactggttcagttgaccctaat
aatgttaatgaggctgcagctgtatctgggagagttttttccccttctggtggtcctggc
atacagtggagaccaggaagtcctttccagaaccaaagtgaaacggggcagcttcgtgga
agaactgaaatagcacctgatcagagagaaaaatttctgcagaagtttcagcaagtgcag
caacaagggcatagtacccttcttggtatgccttctctatctggtggaagtcataagcag
ttttctgctcagcagcagcaaagtcctctcttgcagccggcatcaggtctcagtagcgtt
tcatccgcctcattacagatgccatccaattctatcctttctccctctagtcaacagccg
atgatatcaggtgcatctcaagattctgatggcaattctaaagttgaagaacatcagcaa
caacagaatgctcctgatgattcagtgtctgaatctactgcaaataatgggcttggcaaa
aatcttctaaatgaagaggacttaaaatccacatatgctgtagattcgcctcaggcagga
atgtctggttctcttgctgagcctgctcagagctccagagatgctgatttctcttctggc
caacctttacaatccaatcaaccttctggtaaccttggtgttattggaagaagaagtgtt
gtcgattttggagccattggtgatagtcttagcggaacaaatgttaattctggtggaggg
cgtgaccatttatttaatttgcagatgctagagtcagcttactacaaacttccgcaacct
aaagactcagaacgtccaaggacttatactcctaagcacccggtaataacacctccaagt
tatcctcaagtacaggcgcccattgtcagtaatcctgccttttgggagagagtgggtctt
gatccatatggcactgacaccctcttctttgcattttattatcaacagaacacttaccaa
caatatttggctgcaaaagaactaaagaagcagtcttggagatatcacagaaaatataac
acatggtttcagagacatgaagagccaaaagtcgctacagatgaatttgagcagggaaca
tatgtatacttcgattttcatgttgcaaatgatgacctgcaacatgggtggtgtcaaaga
atcaagaccgagttcacatttgagtataattatcttgaagacgagcttagtgtatag
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