Prosopis cineraria: 129312727
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Entry
129312727 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcin03036
]
129312727
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129312727
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129312727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
ADD_DNMT3
IMS_HHH_1
DNA_pol_lambd_f
HHH
AAA_22
Motif
Other DBs
NCBI-GeneID:
129312727
NCBI-ProteinID:
XP_054811739
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MDTYSLKSVSDLPVPFRXTFSFRFFNSLQSECFPNCFHSDINMVISAPTGSGKTVLFELC
ILRLLSKSISTEERFIHANGTLKTVYIAPSKALVQEKLRDWNQKFGHLGINCLELTGDNE
SYNLRNIQEADIILTTPEKFDAVSRNGIKDGGLSFFSDIALLLLDEVHLLNDPRGAALEA
IVSRIKMVSCNPKLKSNPLAQARFLAVSATIPNIADLAEWLMVPVQGIKRFGEEMRPVKL
TTKVFGMLCPAQNDFLFEKRLQNYIFDILMQYSRGKSALIFCSTRKGAQEAAQRLSQIAM
TFGHSNPFIKNKEQQDRLREASLSCSDKQIAIIHPLWCWFHNGGLCLKDRNLVEGLFLKG
DIQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDT
GMVIIMTRRETVHLYENLLSGCEXVESQLFSCVTEHLTAEIVQLTVSDITKVIDWMKCSY
LYVRMRRNPKKYAVKNGISGDRLEKHVQEPGRLMTKYYLRFNTMKQIMRTPENCTLEDAL
RVICLAEEISWIQLRRNEKKILNEINADKDGRLRFHILGDKGKXKKRIQTREEKIIFWQN
DCLTGDPTVHDLSLIQDTNSLCSNGCRIAKCMKDYFIYKKNYKGAVNSSLLAKSLDQRLW
DDSPYLLKQLPGIGMVTAKALHSMGIKSFEALAEADPRRIEIVTGRKYPFGNHIKDSLLS
LPPKIDMKLEETERQKQGKSKLVVTLTRKSESIQSVKRHYADMIIGVEEDNSILFHEKIR
VDQFTSPYSATILVPISRGKQIIKADFIYEEYIGIDVHQNLSLIQERKSNVQLQRNRKLP
AFPSPEGIHVIEDGNIIAPQKPTEELSNLKSKDETDSIPNFNLLDEELGEEGGCAPEEDE
DDECKIINEKTVFDHIREKAKNFSLLSAYDNIRLASPKVDLLLTRKRAREKRPGVHHEVI
VLDDETERLNISPQAEFTFPAGLRKAEDNTVGSSIDTGVVLTEPEARTYETSTGQTIFDH
IRRKSEDFPLISNLDCKESIFQRKELVSHNHSDSLNAASEMEMESNVSNIVGENILTSYT
ESVDHNKFEGCSGEDRVSTVLKDNKRAPDASSFAHSSRKKHCTCIESEAEKSSLSEARRQ
CGFLETAGKMKEVGSSPVFKSVFSFL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtattcattgaagtctgtttcagatttacccgtgccttttcgcntaactttt
agtttcaggttttttaactcgctccagagtgaatgctttcctaactgtttccactccgat
ataaatatggtaatttctgcgccaactggaagtggtaaaacagtactctttgagctttgc
attttgaggcttctctctaagtccatttctacagaggagagatttatacatgcaaatgga
actctcaaaacagtctatatagccccgtctaaggctttggtacaggagaagcttcgggat
tggaatcaaaagtttgggcacttgggaatcaattgcctggagctgacaggtgacaatgaa
tcttacaatttgaggaacatacaagaagcagatattattctgaccacccctgagaaattt
gatgcagtatcacgtaatggtataaaagatggtggcttgagctttttcagcgacatcgca
ctgctactccttgatgaagttcatttgttgaatgatccacgaggagctgctctggaagca
attgttagtagaataaaaatggtttcttgcaatcctaaattgaaatcaaatcctctcgcc
caagctcgctttctagctgtctctgctactattccaaatattgcggatcttgccgagtgg
cttatggttcctgtccaggggatcaaaaggtttggagaagaaatgaggcctgtaaagttg
acaactaaagtgtttggtatgctatgcccggcccaaaatgactttctatttgagaagcgc
cttcaaaactatatttttgatattctcatgcaatactcaagagggaaatctgcacttata
ttttgttcaacaagaaaaggagcacaagaagcagctcagcgactctctcaaatagccatg
acttttggtcactcgaatccattcattaagaacaaagaacagcaggatcgactgagggaa
gcttctctatcatgcagcgacaagcaaattgcaatcatacatccattatggtgttggttt
cacaatggtgggctttgcctaaaggatcggaatcttgtagaaggcctttttctcaagggt
gatattcaagtactttgcactacaaatacacttgcccatggaatcaatctcccagcacat
acagtggttataaaatcgacacagcacttcaacaaagaaaaaggtctctacatggaatat
gaccgctctacaatattgcagatgtgcggcagggcaggccgaccaccatttgatgataca
ggcatggttataatcatgacaagaagagaaacggtccacctgtacgaaaatctcttgagt
ggttgtgaantggtggaatcacaattgttctcatgtgtgacggagcatttgactgcggaa
attgtccaactgacggtatctgatatcacaaaagtaattgactggatgaaatgttcctat
ttgtatgtgagaatgagaaggaacccaaaaaaatatgctgttaaaaatggaatttctggc
gatcgtttggagaagcatgtacaagagcctggaaggctgatgacaaagtattatttgaga
tttaacactatgaaacagataatgcgaacccctgaaaactgcactttagaagatgccctt
cgtgttatttgtcttgctgaggaaatctcttggatacaacttcgacgcaatgagaagaag
atcttgaatgagatcaatgctgacaaagatggccggcttcggtttcacatccttggagac
aagggaaaanagaaaaagcgcattcaaacaagagaagaaaaaattatattttggcaaaat
gactgcttaacaggcgatcccactgttcatgatctatccctaattcaggacacgaattct
ttatgctcaaatggatgtagaattgctaaatgcatgaaagattattttatttacaaaaag
aattacaaaggagctgtgaattcttcccttctagccaaatcacttgaccagagactctgg
gatgacagtccatacttgttgaaacaattacctggaattggcatggttaccgcgaaggca
ttgcattcaatgggcattaaatcatttgaggcactagctgaagctgatcccaggagaata
gagatagtaactggtcgaaaatacccatttgggaaccatatcaaggattctcttttatcg
ctacctccaaaaattgatatgaagcttgaggaaaccgagaggcagaagcaaggaaagtcc
aaactagtggttacactgactaggaagtcagagtcaatccaatcagtgaaaaggcattat
gctgatatgatcattggtgttgaggaagacaacagcattctctttcatgaaaaaataagg
gtggatcaattcaccagcccttatagtgcgacaatacttgtcccaatctcacgtgggaag
cagatcatcaaagctgattttatatatgaagagtatattggtattgatgtccaccaaaat
ctttccttgatccaagagagaaaatcaaatgtgcaattacaaagaaatagaaagctccct
gcttttccctcgcccgaagggatacatgttattgaagatggcaacataatcgcacctcaa
aagccaacggaagagctatccaatttgaagtctaaggatgaaacagattccattccgaat
tttaacctcctagatgaagagttgggagaagaaggtgggtgtgcgcctgaggaggatgag
gatgatgaatgcaaaatcatcaatgagaagacagtatttgaccacatacgcgagaaagcc
aaaaacttctctctcctgtctgcatatgataatattcgcctcgcatcaccaaaggtcgac
cttcttctgacaagaaagcgcgcccgagagaagagacctggagtccatcatgaagtaatt
gttttggatgatgagacagaaagactcaacatatcaccacaagccgagtttacttttcct
gcggggctcagaaaggcagaagataacacagttggaagctcaatcgacacaggcgttgtc
ctcactgaacctgaagcaagaacatacgaaacgtcaactggccaaacaattttcgaccat
atacgaagaaaatccgaggatttcccactgattagtaatttggattgcaaggagtcaatt
ttccagagaaaggaattagtctcacacaaccattctgattccctcaatgccgcttccgaa
atggaaatggagagtaatgtctcgaacattgtcggagagaacatactcacttcatatacg
gaatcggttgatcataacaaatttgaaggttgcagtggcgaagacagagtaagtacagtg
ttaaaggacaacaagcgagcgccagatgcaagcagctttgcacatagcagtaggaagaag
cattgcacttgtatagaatcggaagcagagaagtcgagcttaagtgaagcaagaagacag
tgcggttttttggagaccgcaggcaaaatgaaggaagtaggttcaagtcctgtgttcaag
agcgtattttcctttctctga
DBGET
integrated database retrieval system
