Prosopis cineraria: 129312889
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Entry
129312889 CDS
T09047
Name
(RefSeq) sm-like protein LSM8 isoform X1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129312889
09123 Folding, sorting and degradation
03018 RNA degradation
129312889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129312889
03041 Spliceosome [BR:
pcin03041
]
129312889
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129312889
mRNA degradation factors
5'-3' decay
Lsm complex
129312889
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129312889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
129312889
NCBI-ProteinID:
XP_054811641
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MSTGLGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSRLDLSKLRAQPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgggcttggacttgagtctcttgtagatcagaccatttcagtcattacaaat
gatggacgaaatatagtgggaatcttgaaaggttttgaccaggcaacaaatataattctt
gatgaatcccacgaaagagttttttctactaaggaaggtgtccagcaacttgttcttggt
ttatacatcattaggggtgacaacattagtgttgtaggtgaattagacgaagatcttgat
tcgaggctggatttgtcgaagctcagggctcagcccttaaagcctgttatccactaa
DBGET
integrated database retrieval system