Prosopis cineraria: 129312973
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Entry
129312973 CDS
T09047
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129312973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129312973
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129312973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129312973
NCBI-ProteinID:
XP_054811752
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MAGKAAATSTTYSPSSTTEKTKAPIFNEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYA
EFGSTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGLDNKEYTAMLHKAL
EGSIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGVMMYDLVASVSVSCLGK
NLVIDPILEEESCQDGSLMITCMPSRYEITQLTVTGDWSTPKINEGMQLCLDACAKLARL
MRSCLKEAAQGSQE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaagctgctgcaacttcgacgacctactcgccgtcttcgaccaccgagaaa
accaaggctcctattttcaatgaagattgggtccgacccgatggccgtggctttcaccag
tgcaggcccgcttttttcagaactggtgctgtgaatgctgcctctggatctgcttatgca
gagtttgggagtaccaaggtcattgtatccgtgtttgggccaagagagagtaagaaggcc
atgatgtacagtgacatagggcgtctaaattgcaatgtaagctttacaacatttgcaact
ccaattcgtggccagggattggacaataaagagtacactgcgatgcttcataaagctttg
gagggttcaataatgttggaaacttttcccaagaccaccgtggatgtttttgcattggta
ctggaatctggtggcagtgatctcccagttgtcatatcatgtgctagccttgccctagca
gatgctggagtaatgatgtatgaccttgttgcctcagtttctgtgagttgtctcggtaag
aaccttgttattgatcctattttggaggaggaaagctgtcaagatggaagcttaatgata
acttgcatgccttctcgttatgagatcacccagctcactgtcaccggggattggtccacc
ccaaagattaacgagggaatgcagctatgcttagatgcttgtgcaaagcttgcaaggctc
atgaggtcatgtttgaaagaagctgctcaaggttctcaagaatag
DBGET
integrated database retrieval system
