Prosopis cineraria: 129313048
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Entry
129313048 CDS
T09047
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129313048
Spliceosome [BR:
pcin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129313048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
DUF1797
Motif
Other DBs
NCBI-GeneID:
129313048
NCBI-ProteinID:
XP_054811852
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MTEPSKVIHVRNVGHEVSENDLLTLFQPFGVITKLVMLRAKNQALLQMQDIASAVNALQF
YSNVQPSVRGRNVYIQFSSHQELTTVDQSQGRGDEPNRILLVTIHHMLYPITVDVLNQVF
SPHGYVEKVVTFQKSAGFQALVQYQTRQSAVVARSTLQGRNIYDGCCQLDIQFSNLDELQ
VNYNNDRSRDFTNPNLPSEQKGRSSQPGYGDAGGMYAVQGSGARAVGFSQMANAAAIAAA
FGNGLPPGITGTNERCTILVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRNKPDHALIQM
GDGFQAELAVHFLKGAMLFGKQLEVNFSKHPIITQGPDTHEYVNSNLNRFNRNAAKNYRY
CCSPTRMIHLSTLPQDVTEEEIVNLVEEHGTIVNSKVFEMNGKKQALVQFETEEQATEAL
VCKHATSLSGSIIRISFSQLQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccttccaaggtcattcacgtccgaaacgtggggcatgaagtatccgaaaat
gatttgcttacactatttcagccttttggagtgataacaaaactggtgatgctgcgtgca
aaaaatcaggctcttctccaaatgcaagatattgcttctgcagttaatgctttacagttt
tattctaatgttcagccaagcgtaagggggaggaatgtttatatccaattttcctcacat
caagaactaactactgttgatcaaagtcaaggacgaggagatgagccaaatcgaattctc
ttggtcacaattcatcacatgctctatcctataacggtggatgttctgaatcaagtgttt
tctccgcatggatatgttgaaaaagttgtgacatttcagaaatcagctggctttcaggct
ctggttcagtatcaaacacgtcagagtgctgtggtagctagaagcacacttcaggggcgt
aatatttatgatggttgctgtcagctggacattcagttctcaaaccttgatgaattacaa
gtgaactacaacaatgatcgttcaagggacttcacaaacccaaaccttccttctgagcag
aaaggaagatcttcacaacctgggtatggtgatgcaggaggcatgtatgctgttcaaggt
tctggagcaagggcagttgggttttcccagatggctaatgctgcagccattgcagctgcc
tttgggaacggtttgcctcctggaattactgggacaaatgagaggtgtacaattctggtc
tcaaatcttaatcctgatagaatagatgaggataaactcttcaacttgttctccctttat
ggcaacattgtgagaattaaacttttgcgaaataaaccagatcatgcacttatccagatg
ggggatggattccaggctgaattggcagtacacttcctgaagggtgccatgctattcggg
aagcaattagaggtcaacttttcaaagcatccaatcataacccaaggtcctgacacacac
gagtacgtaaattcaaatctcaatcgtttcaatcgtaatgctgcaaaaaactaccggtat
tgctgctccccaacaaggatgatccacttgtccactctccctcaagacgtcacagaagag
gagattgtgaacttggtggaggagcatgggactattgtgaacagcaaagtctttgagatg
aatgggaaaaagcaggctctggttcagtttgagactgaagaacaggctactgaagcactt
gtctgcaagcatgcaacctcactttctggctcgataattcggatttccttttcacagcta
cagaacatatga
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