Prosopis cineraria: 129313059
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Entry
129313059 CDS
T09047
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129313059
03036 Chromosome and associated proteins [BR:
pcin03036
]
129313059
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129313059
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
129313059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HTH_44
HHH_9
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
129313059
NCBI-ProteinID:
XP_054811869
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MAKGVVSDEEDEVELEEAEREPVDGDGMEEDEDEDEEEGQDEYENDGFIVDDVEEEEEQD
EEERAESDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKKGQRDSE
EEPSGLSDEEEFVGSGKGGRTAEEKLKLSLFGDDEGAPLEDIAEEEEQGEEEEDADIGEE
DEMADFIVDEEEVDEHGAPMRRKKLKRKKARQAPGVSSSALQEAQELFGDVDELLQSRKQ
SLELREYRETRLEDEFEPVVLSEKYMTEKDDQIRELDIPERMQISEESTGAPPLDASSIA
EESHWILEQLKKGMVPWIHKKDVGNLQIDTHDIVRFLELHHVQKLDIPFIAMYRKEECLS
LLKNPQQPDDENWDKTEKSPTLKWHKVLWAIQDLDQKWLLLQKRKSALQAYYNKRFEEES
RRVYDETRLGLNQQLFESVMRSLKAAETEREVDDVDSKFNLHFPPGEAGVDEGQYKRPKR
KSAYSSFSKAGLWEVASKFGRSAEQLGMILSLETMINELENPKETPEEMASNFTCAMCDT
PQEVLKCARHMAAVEISCEPSIRKHVRANFIDHAVVSTCPTADGNVTIDSFHQFAGIKWL
REKPLSKFEDAQWLLIWKGEEEKLLQVTIKLPEEYLDKLTNEFNDYYISDSVSRSAQLWN
EQRKLILHDAIFRFLLPSMEKEARAYLTSKAKNWLLMEYGKALWNKVSLGPYQRKDNDLS
ADDEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTRSLTLRSQNANDQQRKKNDQER
VLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESL
PHLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPRKEILSWKLSSLESFL
NPDEKFGMVEQIMVDVTNQVGLDVNLAISHEWLFAPLQFISGLGPRKAASLQRSLVRAGA
IFTRKDFVTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYSLAQELA
KDVYEADGTGDVNDDDDALEMAIEHVRDRPSYLKNLDVEEYAVGKKRQNKKQTFYDIKRE
LIQGFQDWRKQYEEPNQDEEFYMISGETEETLAEGKIVQATIRRVQAQKAICALESGLTG
ILMKEDYTDDWRDLVELSDRLHEGDILTCKIKSIQKNRYQVFLVCRESEMRSNRLQSNRN
IDPYYYEDQSSQQSEKDKARKERELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDFGES
IIRPSSRGPSFLTLTLKIYDGVYAHKDIIEGGKEHRDITSLLRIGKTLKIGEDTFEDLDE
VMDRYVDPLVVHLKAMLNYRKFKKGTKAEVDELLRMERAENPMRIAYSFGISHDHPGTFI
LTYIRSMNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDVAPSIRSVAAMV
PMRSPATGGSSGASVGSVWGSSEGGWRSHAGDRDRSSTPGSRTGRTDYRNSGNRDDHPSG
LPHPYSGGRGRGRGRGSYNSRGNNSNNERQDSSFNAARWGSVTKDGDDGLSNFPGAKVQN
SPGREAFPGGWGSGGASGWGGGDSASDAERGSSGWGGGLKKSDNGWSGNAGGGTGW
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggcgtggtctcagacgaagaagacgaggtcgaacttgaagaggcggagcgg
gagccggttgacggagatgggatggaggaggacgaggacgaggacgaagaagaaggtcag
gatgaatatgagaatgatggatttatagttgacgacgttgaggaagaggaggaacaagat
gaagaagagagggcagaaagcgatgatgagcggcagaagaagaaaaagaggaagaaaaag
gaggagtatgttcttgatgaagatgattacgagcttctagaggacaataatatcaatatt
caccgtagaaaggagagcaaaaagtttaagcggctgaaaaagggccagagggactctgag
gaggagccttcgggattatctgatgaggaggaatttgttggaagtggtaaaggtgggcga
actgctgaggagaagcttaaactcagtctatttggtgatgatgaaggagcgccacttgaa
gatattgccgaagaggaggaacaaggagaagaggaggaggatgctgacattggtgaagaa
gatgaaatggcggacttcattgtggatgaggaagaagttgatgaacatggggctcctatg
aggcgaaagaagctgaagagaaagaaagctaggcaggctccaggagtatcttcgtcagca
ttgcaagaagctcaggaattatttggtgatgttgatgagttgctacagtcacgtaagcaa
agtctggaactacgtgaatacagagagactagacttgaagatgaatttgagcctgttgtc
ctttctgagaaatatatgacagagaaggatgatcaaattagggagctcgatattccagaa
agaatgcagatatcagaggagagtactggtgcacctccactagatgcaagtagtatagca
gaggagagtcattggatacttgagcaacttaaaaagggaatggtaccttggattcacaag
aaagatgttggcaatttacagattgacactcatgacattgtcagatttttggaactgcac
catgtacagaaattagacattccttttattgctatgtatcggaaagaggagtgcttaagc
ctattgaaaaatcctcagcaacctgatgatgagaattgggataaaacggaaaagtctcca
actttaaaatggcacaaggtactttgggcaattcaagacttggaccagaagtggttgctt
cttcagaaacgaaaaagtgccctccaagcctactataataaacgatttgaagaagagtcc
cgtcgtgtttatgatgaaacaagacttggattgaaccagcaattgtttgagtcagttatg
agatcgttgaaggctgcagaaacagagagagaggttgatgatgttgactcaaaattcaac
ttgcatttccctccaggggaagctggtgttgacgaagggcaatataaaagacctaaaagg
aaatcagcgtatagttctttcagtaaggcagggctttgggaggttgcaagcaagtttggg
cgtagtgctgagcaacttggaatgattttatcacttgaaacaatgattaacgagttggag
aatcctaaggaaacacctgaggagatggcttcaaatttcacatgtgctatgtgtgataca
cctcaagaagtgcttaaatgtgctaggcacatggcagccgttgagattagttgtgagcct
agcattaggaaacatgtccgtgccaactttattgaccatgccgtggtgtcaacttgtccc
actgctgatggaaatgtaactatagattctttccatcagtttgctgggataaagtggttg
cgggagaaaccattatctaaatttgaggatgcacaatggctccttatatggaagggggag
gaggagaaactccttcaagttactatcaagctgcctgaagagtatcttgataagttgaca
aatgaattcaatgattattacatcagcgacagtgttagtagatctgcccaactgtggaat
gaacagaggaagttgatactgcatgatgcaatttttcggtttctcttaccatcaatggaa
aaagaggcaagagcttatttaacgagcaaagcaaagaattggttacttatggagtatggg
aaggcattgtggaataaggtttctctgggaccatatcaacggaaggataatgatcttagt
gctgatgatgaagctgcccctagggttatggcttgctgttggggtcctggaaagcctcag
acaacttttgttatgttagattcatcaggggaagtgctagatgttctttatactaggtcc
cttactttacggtctcaaaatgcaaatgaccagcaacggaagaagaatgaccaggagcgt
gttttgaagttcatgacagaccaccaaccgcatgtcgttgttctaggagcagtgaatttg
tcctgtactcgtttgaaggatgatatatatgagataatttttaaaatggtggaggaaaat
cctagagatgttggtcatgagatggatggcctcagcattgtgtatggggatgaatctctt
ccacatttgtatgaaaattctcgaatttcctcagaacaacttccctcacagcaaggtata
gtgagacgtgctgtagcacttggaaggtatctgcagaatcccttggcaatggttgcaacg
ttatgtggacctagaaaagaaattttatcatggaaactgagttccttggagagctttctc
aaccctgatgagaaatttgggatggttgagcagattatggtagatgtgactaatcaggtg
ggcttagatgttaatttagccataagccatgaatggttattcgctcctttacagtttatt
tctgggcttggtccgagaaaggctgcctccttacagaggtccctggtaagagctggagca
atttttacccggaaggactttgtgacagaacataaactgggtaaaaaggtttttgtcaat
gctgtaggtttcttgcgtgttcggaggagtggattggctgctagcagcagccaatttatt
gatttgctcgatgatacaagaattcatccagaatcatattctcttgcacaagagttggct
aaagatgtgtatgaggcggatggaacaggtgatgtgaatgatgatgatgatgcgctagag
atggctatagagcatgtgagagatcggcctagttatttgaaaaatcttgatgttgaggaa
tatgctgtggggaagaagcgacagaataaaaaacaaactttctatgacataaaaagagaa
ttgattcagggatttcaggattggcgtaaacaatatgaagaaccaaatcaggatgaggag
ttttatatgatatcaggtgaaactgaggagacccttgctgaagggaaaattgtccaagct
acaattcgcagagtgcaagcccaaaaggccatatgtgcgcttgaatctgggttaactgga
attctcatgaaggaagattacacagatgactggagggatttagttgagttatctgacagg
ctacatgagggtgacattctcacttgcaaaatcaaatcaatacagaagaataggtatcag
gttttccttgtttgtagggagagtgaaatgagaagtaatcgtttacagagtaaccgtaat
attgacccctattattatgaagaccagagctctcaacagagtgaaaaagacaaagctcgg
aaagagagagagcttgcaaagaaacatttcaagcctaggatgatagttcatccacgtttt
cagaacataactgcagatgaagcaatggagtttttgtctgacaaagattttggagaaagt
ataatccggcctagctcacgtggaccttcatttcttactttgactcttaaaatctatgat
ggagtttatgctcacaaggatataattgaaggtggaaaggaacacagggacatcacaagc
ttacttcgaattgggaagacactcaaaattggagaggacacttttgaggatttagatgag
gtaatggatcgctatgttgatcccttggtagttcacttaaaggctatgctaaactatcgc
aagttcaagaagggtacaaaggcagaagttgatgaacttctgaggatggagagagcagag
aatcctatgcggatagcctatagttttggcatttcacatgaccatccaggcacgttcata
ttgacttatataagaagtatgaatccccaccatgagtacattgggctttatccaaaagga
ttcaaattccggaaaaggatgtttgaggacattgatcggcttgtggcctatttccagagg
cacattgatgatccccagcatgatgtggcgccttccattagatctgttgctgctatggtg
ccaatgcgaagcccggccactggtggatcctcgggggcatcagtgggcagtgtgtggggt
tctagtgaaggtggttggagaagtcatgcgggtgatagggatcgatcttcgacacctggc
tccaggacagggcgaactgactacagaaacagcgggaatcgggatgatcaccccagtggt
ctgccacacccatacagtggtggacgtggacgtggacgtggtcgaggctcatataacagc
cgaggaaacaactccaataatgaaaggcaggattctagctttaatgcagctagatggggt
tctgtcacaaaggatggagatgatggtttaagcaattttcctggagccaaggttcaaaat
tccccaggaagggaagcctttcctggtggttgggggtctggtggagccagtggttggggt
ggtggtgacagtgcaagtgatgcagagcgtggaagctctggctggggaggcggtctcaag
aaatctgataatggctggtctggaaatgctggtggtggcactggctggtga
DBGET
integrated database retrieval system
