Prosopis cineraria: 129313539
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Entry
129313539 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pcin
Prosopis cineraria
Pathway
pcin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129313539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129313539
03036 Chromosome and associated proteins [BR:
pcin03036
]
129313539
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129313539
Coactivators
SAGA/TFTC/STAGA complex
129313539
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129313539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
129313539
NCBI-ProteinID:
XP_054812720
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDMSTSQPSGSDTVLSQGNSTTYSQ
SLPQWPASSHDNKTDPQTQQDPNIAQQQQQSSSEMEIKHSGQLQNVAPQDVNHPPPSQKQ
SQDEGHQGQTVHGSLQNPQTSGIPNPGKDPVIKNEPVKTHNQSNESQYIKLQQMSNQQAT
VTEQPSGQINRSKQVPFGLLLPILLPQLPKDRAMQLQTLFAKLKKDEIPKDNFVRLMKSI
VGDQMLRMALAKVQSQTRSNQGPIGQQHPMRMPAVSSGATQFSDPHGLAQLHHRSVNPPS
NQSHINSSTVHVKNEPVYPTMDNSVKKSQELDVKIESQAVQPSQISSSSSNFASQESERS
SLHIQGLTKQQQQHLHFSSAHGSSGTNYNLYSGTSSSSTSLKAPLHDSHLRQIPHQNIAQ
NHLGGPTQGMNLIGMTKLDRQNSINDPKRLQGVSAPPVVSSAGSQQTPNAWQPSNVKKEP
TDLSAEQQQRHHLSKLHGISSVGTGQIEQGNGNQGTSKDEFSRGLPASTNMPPTTTSSLL
HSNSGTPSMIAQQEPSVPLSSQIPTNPSGIIARAPLKKPSLGQKKPLEGLGSSPPPPSKK
QKASGASMEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRISEASRRVVQEEEERLIL
QKAPLQNKLMDIMVKCGLKGMSNDVEKCLSLCVEERMRGLISSLIRLSKQRVDFEKTRHR
VVVTSDVRQQIMAINKRAREEWEKKQTEAEKTRKLNEAESNPGLDCDKDKDEGRNKSTKV
NKEEDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKREGVVDASSSSQPAKDASRK
SASSSGRSTKDNSDGEKKTSTSFGTSGTARKLGRNQGIAHQTRVARSISVKDVIAALERE
PQMSKSPLIYSLYERIHSDALAE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggatccatctatagttaagcttcttgaagatgatgaggatgaaacgatgcattcaggg
gcagacgtggaagccttccaggccgccttaaatagagacataggaggagacatgtctact
tctcagccttctggttcagacacagttttgtctcaaggaaacagcaccacatacagtcag
tcattaccacagtggccagcttctagccatgataataaaactgatcctcaaactcaacaa
gatcctaacattgctcagcagcagcaacaatcttcgtctgagatggagatcaaacacagt
ggccaactgcagaatgttgctcctcaggatgttaatcatccacccccctctcagaagcaa
tctcaagatgaaggtcaccaagggcagactgtacacggctccctccaaaaccctcaaacg
agtgggatcccaaatcctgggaaagatccagttattaagaatgagcctgtcaaaacgcat
aatcagagcaatgaatctcaatatatcaagttgcagcagatgagtaatcaacaggcgaca
gtcactgagcagccaagtggccaaataaatcgtagtaaacaagtgccatttggcctattg
ctgccaatcttgcttccgcagcttcccaaagacagagccatgcaactccaaactttgttt
gccaaattaaagaaagatgaaattccaaaggataattttgtgaggcttatgaaaagtatt
gtaggcgatcagatgctcagaatggcattagcaaaagtgcaatcacagacgagatccaac
caaggacccattgggcagcagcaccctatgaggatgcctgctgttagttcgggggcaaca
cagttcagtgatccccatggattagcacaattgcatcacagaagtgtgaaccctccttca
aaccaatctcatattaattcttcaactgtacatgtgaagaatgaaccagtttatccaact
atggataatagtgtcaaaaaatctcaggaattggatgttaaaatagaatcccaagcagtg
caaccgagtcagatatcatcttccagttccaactttgctagccaagaatcagaaaggtcc
tccttgcacatacaagggcttactaagcagcagcagcagcatctgcatttttcatcagca
catggaagtagtggtaccaattataatctttattctggcacaagcagtagttctacatct
ctcaaagcgccactgcatgattcccatttgaggcaaattcctcatcaaaacattgctcaa
aatcacctgggggggcccacacagggtatgaatctgattggcatgacaaaacttgataga
cagaattccatcaatgatccaaagagactgcagggagtgtctgctcctcctgttgtaagt
agtgcaggatcacaacaaacacccaatgcttggcaaccttcgaatgttaaaaaggaacct
actgacctgtctgctgagcagcaacagagacatcatttatctaaattgcatggaatttct
tctgttggcactggtcagattgaacagggaaatggcaatcagggaacttcaaaggatgag
ttttcaagaggtcttccagcatctacaaatatgccgcctacaactacttctagcttgttg
cattccaattctggtaccccttcaatgattgctcaacaggaaccaagtgtcccgctaagc
tctcagatccccacaaacccttcagggattattgcaagggcgcctctgaaaaagccctct
cttggccaaaagaaaccactggagggacttggttcgtcaccacctcctccaagtaagaaa
cagaaagcatctggggcttctatggaacaaagcattgaacagcttaatgatgttactgct
gttagtggagttgatcttagggaggaggaagaacagttattttcagggccaaaagaggac
agccgaatttcagaagcatctcgaagagtcgtgcaagaagaagaagaaagactgattttg
cagaaagcaccactgcagaacaaattgatggatattatggtcaaatgtggtttgaagggt
atgagcaatgatgtagagaaatgcttgtctctgtgcgtggaggaaagaatgcgtggatta
ataagtagcctgatcagactctcaaaacagcgagtggattttgagaagaccagacaccgg
gttgttgtcacatcagacgttcggcaacaaatcatggcaattaataagagagcaagggaa
gagtgggagaagaaacagacagaagcagagaagactcgtaaacttaatgaagctgagagt
aatcctgggcttgattgtgacaaggataaggatgaaggtcgtaataaatcaacaaaggta
aataaggaagaggatgacaaaatgaggacaaatgctgcaaatgttgctgctcgagctgct
gttgggggagatgacatgctgtcaaaatggcaactcatggcggagcaagcccgtcaaaaa
cgtgaaggagtggtagatgcatcatctagttctcaacctgctaaagatgcgagtcgcaag
tctgcatcttcatctggaagaagtaccaaggataattcggatggggagaaaaagacttca
acgtcttttgggacttctggaactgctcgaaaacttgggagaaatcaaggcattgcacat
caaactcgagtagctcgtagcatctctgttaaggatgtgattgcagctctggaaagggaa
ccccagatgtccaagtcaccactaatatatagcttgtacgagagaattcattccgatgca
ctggctgaataa
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