Prosopis cineraria: 129313898
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Entry
129313898 CDS
T09047
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pcin
Prosopis cineraria
Pathway
pcin04120
Ubiquitin mediated proteolysis
pcin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129313898
04120 Ubiquitin mediated proteolysis
129313898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcin04121
]
129313898
Enzymes [BR:
pcin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129313898
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129313898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4_3
RVT_3
zf-RING_16
zf-RING_5
zf_RING_Vps8
zf-RING_11
zf-C3HC4_4
zf-RING-like
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
129313898
NCBI-ProteinID:
XP_054813268
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MVTRICNQNHLFGDVIEIARLFLERNRTISFDFIYREANICAHLLAQLSHYWISVDFYTY
VHPPPLYQKLPVFTFYLELIRDLLHLSMYMCFFLVIFINYGVPLHLIWELYETFRNFKVH
VADYIRYRKITSNMNDRFSDATPEELNASDATYIICREEMTTAKKLICGHLFHVHCLRSW
LEGQHTCPTCRALVVPPENGATTAGGQHGSQSDRQGTRTGTSTGNSSQAEGGNGVATDNL
SRHQVRLQTTAASMYEKSYVYPSPSATSLVWYISDLPSTFLYILKQTDPETMNLTEDTLC
AWVVLVEK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggttaccaggatttgcaatcaaaaccatctgtttggtgatgttattgaaattgctaga
ctcttccttgaaagaaatcggactatttcttttgatttcatatacagggaagcaaacatt
tgtgctcacttattagcacaattatctcattactggattagtgttgatttttatacctat
gtccatcctccacctctttatcagaagttgccagtcttcacattctacttggaactcatc
agggatttgcttcacttgtctatgtatatgtgtttcttcctcgtgattttcataaattat
ggtgtgcctttacacttaatatgggagctgtatgagacatttaggaacttcaaagttcat
gttgctgactacatacgctatcgtaagattacttcaaatatgaatgatcggttttcagat
gcaacccctgaagagcttaacgcaagcgatgctacatatattatctgtcgtgaagagatg
actacagccaagaagcttatatgtggacatctttttcatgtgcattgcctccgatcatgg
ttagaggggcaacatacttgccctacctgcagagccttggttgtaccgcctgaaaatggc
gcaactactgctggagggcagcatggatcacagtcagatcgacagggaacaagaacggga
actagtactggaaactcatctcaagctgaaggtggcaatggggtggctactgataatttg
agtcgtcatcaagttagactccaaactaccgctgcctcaatgtatgagaagtcttacgta
tacccatcaccatctgcaacttctttagtatggtatatcagtgatttaccatccaccttt
ctttatatacttaaacagactgatccagaaacaatgaatttaactgaagacacattgtgt
gcttgggttgttcttgttgaaaaatag
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