Prosopis cineraria: 129314267
Help
Entry
129314267 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: ERAD-associated E3 ubiquitin-protein ligase HRD1A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pcin
Prosopis cineraria
Pathway
pcin04120
Ubiquitin mediated proteolysis
pcin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129314267
04120 Ubiquitin mediated proteolysis
129314267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcin04121
]
129314267
Enzymes [BR:
pcin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129314267
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129314267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-HC5HC2H
zf-RING_11
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
129314267
NCBI-ProteinID:
XP_054813627
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MVAVSLCIAKMMRLQSYAALSFLATLAVTHHAFNSRGQFYPAMVFRSTSKINLVLLLNMG
LVIMCLLWQLTKKVFLGTLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTAL
LLIKALHWLAQKRVEYIETTPAVPLLSHIRIVSXMGFLLLLDGLFFYSSVKHLILSWQAS
VSLFFAFKYMILATTTVSIFVKYLFYVSDMXEGQWERKPVFTFYLELIRDLLHLSMYMCF
FLVIFMNFKVRVADYIRYHKITSNMNDRFSDATPEELNASDATCIICREETTTAKKLICG
HLFHVHCLRSWLERQHTCPACRALVVPPENGATTARGQHGSQSDRQGTGTG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgtttctctgtgtatagcaaaaatgatgaggctacagtcgtatgcagcgctt
agtttccttgcaactctagctgttacgcatcatgcattcaacagcagaggtcaattttat
ccagcaatggtttttcggtcaacttccaagatcaacttggtacttcttctcaacatgggt
ctggtcattatgtgtcttttatggcaattaacaaagaaggtatttcttggcacactccga
gaggcagaggttgagaggcttaatgagcaatcatggagggaggttatggaaatccttttt
gccatcaccatttttaggcaggatttctctgttacattccttgctatggtcacagcactg
ttgttgatcaaagctttacattggttggctcagaaaagagttgagtatattgagaccact
cctgcagtgcccttgttgtctcacattcgaattgtgtctnntatgggtttcctcctcctt
ctggatggactgtttttttatagttccgtgaagcatttgatactatcatggcaggcttca
gtttccctcttttttgcttttaagtacatgatactggcaacaacgacagtgtcaattttt
gtaaaatatcttttctacgttagcgacatgnnggaaggacaatgggaaaggaaaccagtc
ttcacattctacttggaactcatcagggatttgcttcacttgtctatgtatatgtgtttc
ttcctcgtgattttcatgaacttcaaagttcgtgttgctgactacatacgctatcataag
attacttcaaatatgaatgatcggttttcagatgcaacccctgaagagcttaacgcaagc
gatgctacatgtattatctgtcgtgaagagacgactacagccaagaaacttatatgtgga
catctttttcatgtgcattgcctccgatcatggttggagcggcaacatacttgccctgcc
tgcagagccttggttgtaccacctgaaaatggcgcaactactgctagagggcagcatgga
tcacagtcagatcgacagggaacaggaacaggatag
DBGET
integrated database retrieval system
