Prosopis cineraria: 129314830
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Entry
129314830 CDS
T09047
Name
(RefSeq) vacuolar sorting protein 18 isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pcin
Prosopis cineraria
Pathway
pcin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129314830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcin04131
]
129314830
Membrane trafficking [BR:
pcin04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129314830
Hops complex
129314830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_11
zf_RING_Vps8
Nup54_57_C
RPN1_RPN2_N
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
129314830
NCBI-ProteinID:
XP_054814241
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MPLPKFNLFFLIFQSSFVTTVARPNLDLQQGLSTPSPSRVPSPLQQMEQGRQVFEVDLLE
RYAAKGRGVITCMTAGNDVIVIGTSKGWVIRHDFGVGDSYEIDLSAGRPGEQSIHRVFVD
PGGSHCIATVVGAGGAETFYTHAKWTKPRVLSKLKGLLVNAVAWNKQQITEVSTKEFIIG
TDSGQLHELAVDERDKKEKYIRFLFELTELPEAFMGLQMETASLINGTRYYVMAVTPTRL
YSFTGFGSLETVFSSYLHRTVHFMELPGEIPNSELHFFIKQRRAVHFAWLSGAGIYHGSL
NFGAQHSSPNGDENFVESKALLDYSNLPEGTEVVKPSSMALSEFHFLLLIGNKVKVVNRI
SEHILEELQFDQTSDAAPKGIIGLCSDATAGLFYAYDQNSIFQVSVNDEGRDMWKVYLDM
KEYAAALANCRDPLQRDQVYLVQAEAAFSAKDFVRAASFFAKINYILSFEEVTLKFISAG
EQDALRTFLLRKLDSLAKDDKCQITMISTWATELYLDKINRLLLEDDSAWENHNAEYQSV
IKEFRAFLSDSKDVLDETTTMKLLESYGRAEELVYFASLKGQYEIVVHHYIQQGEVKKAL
EMLQKPAVPVDLQYKFAPDLIALDAYETVESWMATKNLNPRKLIPAMMRYSSEPHAKNET
HEVIKYLEYCVHRLHNEDPGIHNLLLSLYATQEDDSTLLRFLQCKFGKGQETGPEFFYDP
KYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEADKVEDDEDLRKKLWL
MIAKHVVEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAICSSLED
YNKQIEQLKQEMNDATHGADNIRNDINALAQRYAIIDRDEECGVCRRKILTAGREYGTAR
GFTSVGPMPPFYVFPCGHAFHAQCLIAHVTRCTDEAHAEYILDRQKQLSLMGSEARRDSN
GTLSPEDSTIPSMSPADKLRSQLDDAIASECPFCGELMIIEISLPFILPEESQHVASWEI
KPNVNVGSQRNIPLPV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgccactccccaaattcaacctatttttcctcatttttcaatcatccttcgttaccacc
gtcgcgcgtcccaaccttgacctgcagcagggcctgtcgactccgtcaccgtcccgagtg
ccgtcaccactgcaacagatggaacaagggaggcaggtgttcgaagtcgaccttcttgaa
aggtatgctgcaaaagggcgaggagttattacatgtatgactgctggaaatgatgtcatc
gtgataggaactagtaaaggctgggtcatcaggcatgactttggggttggcgattcatat
gaaattgatctctccgctggccggcctggtgagcaatctatccacagggtgtttgttgat
cctggagggagtcactgtatagccactgttgttggtgctggaggggctgaaacattttat
actcatgcaaaatggaccaagccccgagttttaagcaagctgaaaggccttcttgtgaat
gctgttgcatggaacaagcagcagataacagaagtttccacaaaggaattcattattggt
acggacagtggccaacttcatgaacttgccgtggatgaaagggacaagaaagaaaaatat
attaggtttctctttgaattaacagaacttccagaagcttttatgggtttacagatggag
acagccagcttaatcaatggaactagatattatgtgatggctgttactccaacacggctt
tattccttcactggctttggatcattggaaactgttttttcaagttatttacatcgaacg
gtgcattttatggaacttcctggagaaataccaaacagtgagctgcattttttcatcaag
caacgaagagcagtacattttgcatggctttctggtgctggtatttaccatgggagctta
aattttggtgcacaacatagttctccaaatggggatgaaaattttgttgaaagcaaggct
cttttggattactcaaacttgcctgaaggcacagaagttgtcaaaccaagttcgatggcg
ttgtctgaatttcatttcttgctgctaatagggaataaggtcaaggttgtaaatagaatt
agcgagcacatcctggaggaacttcagtttgatcaaacttcagatgcagcaccaaagggt
attattgggctatgtagtgatgccactgctggtctgttctatgcatatgatcagaactct
atctttcaggtgtctgttaatgatgaaggtcgagatatgtggaaggtatatcttgacatg
aaagaatatgcagccgctttagcaaattgtcgtgaccctcttcaaagggaccaagtatat
ttagtgcaggctgaagctgcattttctgcaaaggattttgttagagctgcatctttcttt
gccaaaattaattatattctatcatttgaggaagtcactctgaagttcatcagtgctggt
gaacaggatgctttgagaacttttctattgcggaaacttgatagtttagcgaaagatgat
aaatgccaaataacaatgatatccacatgggcaaccgagttatatttggacaagataaat
cgactgcttttggaggatgattctgcttgggagaatcacaacgcagagtaccaatcagtc
attaaagagtttcgtgcttttctcagtgactccaaggatgtattggatgaaacaactacg
atgaaacttttggaaagttatggaagggctgaagaattggtttattttgctagcctgaag
ggccagtatgagattgttgtccatcattacattcagcaaggagaagtgaaaaaagctttg
gaaatgcttcagaagcctgctgtgcctgtagaccttcagtacaagtttgccccagacctt
attgcccttgatgcatatgagactgtggagtcatggatggctacgaagaacctgaacccg
aggaaactgattcctgcaatgatgcgttattcaagtgaacctcatgcaaagaatgagaca
cacgaggtcatcaaatatcttgaatattgtgttcatcggttgcataatgaagacccggga
attcataacctcttgctttctttatatgcaacgcaggaagatgatagtacgctccttcga
ttcctgcaatgcaaatttggaaagggacaagaaactggccctgaatttttctatgatccc
aagtatgctctacgtctttgcttaaaggaaaaacgaatgcgtgcatgtgttcatatatac
agcatgatgtctatgcacgaagaggcagttgctcttgcactacaggttgatccagagcta
gctatggctgaagctgataaagttgaagatgatgaagacttgagaaagaagctttggctc
atgattgccaagcatgttgttgaacaagaaaaaggaactaaaagagaaaatataaggaag
gcaattgcatttcttaaagaaactgatggccttttaaagattgaggatatactacccttc
tttccagactttgccctgatagatgacttcaaggaggctatctgctcatcgttggaggat
tacaacaaacaaattgaacagctgaagcaagagatgaatgatgcaacacatggtgctgac
aacatcagaaatgatatcaatgcccttgctcagagatatgctattattgatcgggatgag
gaatgtggggtatgtcgacgaaaaattctaactgctggcagggagtatggcacagctcgt
gggtttacatcagtagggccaatgcctcctttttatgtctttccatgtggacatgccttc
catgcacaatgcctgattgcccatgtgactcgttgtactgacgaagcccatgctgagtac
atactggatcggcaaaagcaactttctttgatgggtagtgaagcaaggagggattccaat
ggtaccctttctccggaagactccaccatacctagcatgagcccagcggataagctccga
tcacaactggatgatgcaatagcgagtgaatgcccattctgtggcgagttgatgatcata
gagatttctttgcctttcatccttcccgaggaatcgcagcatgttgcctcgtgggagata
aaaccaaatgttaatgttgggagtcagagaaatatccctctacctgtatga
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integrated database retrieval system
