Prosopis cineraria: 129314856
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Entry
129314856 CDS
T09047
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129314856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129314856
Enzymes [BR:
pcin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129314856
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129314856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
129314856
NCBI-ProteinID:
XP_054814299
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
MAKIPECATDSVEAVAFSFLTTEEIQKTSFVKITNPILLDGVERPVRGGLYDPALGPSDD
RTLCESCGQPSKHCPGHFGRIELVSPVYNPLLFNALSSILQRTCFSCHCFRASRHEVDKI
SSQLELIVKGDIVGAKKLDSPDPSESTCMCDDDRRQCHSAEHLQVKWNSHQFSEAMSVLN
NFLRRGNKKCNNCGFSNPKISKPTFGWFNVNGLSSEKARGNVIRQYADEIISDVIPSENG
DNSDEDMPPTTSTGTINSASKGYQKKREELAHAFAKNKKFSGPLLPSEVKGILELLWKNE
PQFCSRISDIQDLGFGKKAGHLMFFLETILVPPTKFRPPTKGGESVMEHPQTVLLTKVLQ
SNISLGNAYLNNLDHPIIIRRWMDLQQSVNLLFDNRTMSGQKDVASGICQLLEKKEGIFR
QKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIRNGPE
SHPGATHYADKTSTVKLTQNGKVLSMTSRKLSSSRGVIMQHGKIQDHEFEGKVVYRHLKD
GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEIS
RAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYISGVST
AWLGSFNGKPGQKIYVSNSMTQISLLPPAIWKPEPLWTGKQVISALIYYIARGHTPFTVE
KSAKIPRDFFKTQTGERKKGTGGGISRKNEEPDEDKLLIYKNDLVRGVVDKAQFGDFGMV
HTVQELYGPDIAGNLLSSLSRLFTAFLQMHGFTCGVDDLLVTEEKDGERKKQLESCEEIG
ETVHREFIEAMDGAEMDSFTLQLNIEKKIREIGEAALTYLDRKMISSLNSKTSSGVLKVL
LSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGRRVPRMVSGKTLPCFPP
WDCSSRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLK
VCYDHSVRDADGSIIQFHYGEDGVDVHQTSFLTKFESWLTNKETIYSKCHREIDRSSPYI
NKLPNALKEKAENFICGISSKNRIFGSINRAEFLKLMEHKYVSSLAQPGEPVGVLASQSV
GEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASRDIKTPVMTCPLRQGKSMDHAIR
LADNLKKITVADIIESMKVSVVPLAVDGGDICSIYKLEMKLYKPKHYPKYADILLEDWEE
TLEVVFVRELEDAIENHLLLLSKISGIKNFTSDSSKSLEEDDSTNGSKDKKDHNDGDGGG
DDDDDDGGEDAEEGEDLGTDAQKRKRQGRDEIDYEDGAGEETHEGEQLEETIGEDDIHDE
SDIEVNENDVTRVLESKNGKSIDEKPKMKSKNILKKETDRAVFVKAKGMHFEVHFRFTKE
PHILLAQIASKTAKKVCIQNFGKVDQCRAITCKENQVIYYGKDHRKREDIPSSVKEKIPA
LQTTGVDFVTFWELQDQLDVRFIYSNNVHAMLETYGVEAARETIIREITNVFKSYGISVN
IRHLTLIADYMTHAGGYRPMSRIGSISESVSPLSKMSFETAARFIVEAAYHGEVDCLETP
SSRVCLGLPVKMGTGSFDLMHKL
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatacccgagtgtgcaacggattctgttgaggcagttgcattcagtttcctg
accactgaagaaatacagaagactagctttgtgaagataacaaatcccatattgcttgat
ggtgtagaacggcccgtgcgcggtggactgtatgatcctgcattaggcccatcggatgac
aggactctttgtgaatcatgtggtcagccttcaaaacattgtccaggtcattttggtcgt
attgagcttgtttccccagtctataaccctttgctgttcaatgcacttagcagtattctg
caaagaacttgtttctcttgccattgctttcgggccagcagacatgaggtggacaaaatt
tcatcccaattggagctcattgtgaaaggggatattgttggggccaaaaaattggattca
cctgacccaagtgaatccacatgtatgtgtgatgatgaccggagacagtgtcatagtgct
gagcacctgcaagtgaagtggaactcacatcaatttagtgaagcaatgtctgttctaaac
aattttctgagacggggtaacaagaagtgtaataattgtgggttttctaatccgaaaatt
agtaaaccaacctttgggtggtttaatgtgaatggtctctcaagtgaaaaagctagagga
aatgtcattaggcaatatgctgatgaaattatcagtgatgttattccttcagaaaatggt
gataattcagatgaagacatgcctccaactacttctacagggactattaatagtgcttca
aaagggtatcagaaaaaacgtgaggaattggctcatgcgtttgctaagaataagaaattt
tctgggcctttgttaccatcagaggttaaaggtatattggaacttttgtggaaaaacgag
cctcaattctgttctcgtattagtgacattcaagatctgggatttggaaagaaagcaggt
catttgatgttctttctagagactattcttgttccaccaaccaaattccgacccccaacc
aaaggaggcgagtctgtgatggagcatcctcaaactgttttgttgactaaggtcctacag
tccaacatttccttaggaaatgcctatctcaacaacttagatcacccaataattatcagg
cggtggatggatcttcagcaatctgtaaatctgctatttgacaacagaactatgtctggt
caaaaagatgttgcttctggaatttgtcagttgttagagaagaaggaaggcatcttccgc
cagaaaatgatgggaaagagggttaattttgcatgccgctctgtcatatcaccagatcct
tatttagctgtcaatgaaattggaattcctccatattttgccttaagattaacttatcct
gagagggttacaccctggaatgtagtcaagttaagagaggctatacgtaatggcccagaa
tcccacccaggtgccacacactatgctgataaaacatccactgtcaagctcacccaaaat
gggaaagttctatccatgacctcaaggaagctgtcatcttcaagaggggttatcatgcaa
catggcaagatacaagatcatgaatttgaaggcaaagttgtgtatcgtcatttgaaggat
ggagacattgtgcttgtcaaccgacagcctacacttcataaacccagtataatggcacat
gtagttcgagtcttaaagggggagaaaacagtgcgaatgcattatgcaaactgcagtact
tacaatgctgattttgatggtgatgagattaatgttcattttccacaagatgaaatttcc
cgtgctgaagcctataacattgtaaatgccaataatcaatatgtcaaacctaccagtggt
gatccaataagagccttgattcaggatcatattgtcagtgctgcacttcttacaaagaag
gatacttttttaagttatgaagagttcaatcaacttctatacatttctggtgtatccact
gcttggctaggctctttcaatgggaagcctggtcagaaaatttatgtgtcaaattctatg
actcaaatttcactacttcctccagcaatatggaagccagagcccctatggactggaaaa
caggttatcagtgcattgatatattatattgccagaggtcacaccccatttacagttgag
aaaagtgcaaaaatcccacgtgattttttcaagactcaaactggggagaggaaaaaaggc
acaggaggaggtatatcaagaaagaatgaagagcctgatgaggataaattgttgatatat
aaaaatgatttagtccgtggtgtagttgacaaggctcaatttggtgacttcggcatggta
catacagtgcaagaactttatggcccagatattgctggcaatctgctttcgtcattaagt
cgtttattcacagcctttttacagatgcatgggttcacttgtggagtagatgatcttcta
gtaactgaagaaaaggatggtgaaaggaagaagcaacttgaaagctgtgaggaaattggt
gaaactgttcatcgtgaattcattgaagccatggatggtgctgaaatggactctttcaca
cttcaattaaatattgagaaaaaaatacgtgaaattggagaagcagccttaacatacttg
gataggaagatgataagcagtcttaactccaaaacaagctctggggtgttgaaggtgctt
ctttctgaaggaatattgaaaccttccggaaagaattgtatttctcttatgactacatct
ggagctaaaggtagcatggttaatttccagcaaatatcttctcatttaggtcaacaagag
ttggaaggaagacgagtccctcgcatggtttctggaaagaccttaccatgttttcctccg
tgggattgctcctctagagcaggagggtttattattgatcggtttcttacaggtctacgt
ccacaagaatattacttccattgcatggctggtcgtgaaggattagttgacacagcagtc
aaaacatcaaggagtggatacctgcaaagatgcctgataaaaaacctcgaatgcctaaaa
gtctgttatgatcattctgtccgcgatgctgatgggtcgattattcagtttcattatgga
gaagatggggtggatgtccatcaaactagctttctcaccaaatttgaatcatggttaact
aataaggaaacgatttacagcaaatgtcaccgtgagatagacagatccagtccttatatt
aacaagttgcccaatgctcttaaagaaaaagcagaaaacttcatttgtggcatctcttct
aagaatagaatttttggttcaattaatcgagcagagttcttgaagttgatggagcacaag
tatgtctcaagtcttgcacagccaggagaaccagttggtgtgttggcttctcaatctgtg
ggagaaccgtcaacacagatgactttaaatacattccaccttgctggtcgaggtgaaatg
aatgtgactcttggaattccgagactgcaagagatcttgatgactgcctcacgtgatatc
aagaccccagtcatgacatgccccttgagacagggtaaatccatggaccatgccattcgc
cttgctgataacctaaagaaaataacagtagcagacataatagagagtatgaaagtgtct
gttgtaccattagctgttgatggtggtgatatttgcagtatatataagttggagatgaag
ctttacaagcctaaacactacccaaagtacgctgatatattgcttgaggactgggaggaa
actctagaagttgtctttgttagagagttggaggatgctattgaaaatcacttgctactg
ctctctaagataagtggcataaaaaacttcacgtcagattcttcaaaaagtttggaggaa
gatgattctaccaatggttctaaagacaaaaaagatcacaatgatggtgatggtggtggt
gacgatgacgacgacgatggtggggaggatgctgaagagggtgaggatcttggtactgat
gcacagaaaagaaaacgacaaggtagggatgaaattgattatgaagatggtgctggtgaa
gaaacacatgaaggagagcagttggaggaaacaattggagaggatgatattcatgatgaa
agtgatattgaagtcaatgagaatgatgtcactcgagtacttgaatccaagaacggcaag
tctattgatgaaaagcctaaaatgaaatctaaaaatatactaaaaaaagaaaccgacagg
gcagtctttgtcaaagcaaaagggatgcatttcgaggtccattttagatttaccaaggaa
cctcatattttgttggctcagattgctagcaaaacagcgaagaaggtttgcatccaaaac
tttggtaaggttgaccaatgtagagctattacgtgcaaggagaatcaagtaatctactat
ggtaaagatcacaggaaaagggaagatattccatcctcagtaaaggaaaaaataccagca
cttcagacgaccggtgtagatttcgtaacattctgggaattgcaagaccaacttgatgtt
aggttcatatattcaaacaacgtccatgcgatgctagagacgtatggggtggaagctgcc
agagagaccatcatcagggaaataacaaatgttttcaaatcttatggtatatctgtaaat
attcggcacttaacccttattgccgattatatgacgcatgcgggtggctatcgtcctatg
agcagaattgggagcatatctgagtccgtatctcctttaagcaagatgtctttcgagaca
gcagccagattcatagttgaagcagcctatcatggggaggttgactgcttggagacgcca
tcttcgagagtctgtcttgggttgccagtaaagatgggtactgggagttttgacttgatg
cataagctctaa
DBGET
integrated database retrieval system
