Prosopis cineraria: 129315176
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Entry
129315176 CDS
T09047
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcin
Prosopis cineraria
Pathway
pcin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129315176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129315176
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129315176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
NPV_P10
DUF7006
SOAR
Motif
Other DBs
NCBI-GeneID:
129315176
NCBI-ProteinID:
XP_054814711
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MDENLEEQNKLPKLKLDAKQAQGFLHFFKTLPHDPRAVRLFDRQDYYTAHGENATFIAKT
YYHTTTALRQLGSRSDALSSVSVSRNMFETIARDLLLERTDHTLELYEGSGSNWRLIKSG
TPGNISSFEEILFANSEMQDSPVVVALSPNFQENECTVGLGFVDLTKRVFGMAEFLDDHH
FTNVESALIALGCKECLLLMESGKSNENRMLYDALTKCGVMLTERKKSKYKTRDLVHDLG
RLVKGSIEPIRDLVSAFEFAPGALGALLSYTELLVDESNYGNYTLQSYNLDSYMRLDSAA
MKALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVKEINSRLDVVQAF
VEDAVLRQDLRQHLKRISDVERLVRNLQKQSAGLQHVVKLYQSCIMLPHIKSALEIYDGQ
FSSIMKERFFKPLELWTDDDMLNKFIGLVEAAVDLDQLENGEYMIASRYNSTLTKLKKKQ
ESLESSIHNLHQETAKDLDLPIDKALKLDKTTQFGHVFRITKKEEPKVRNKLSTKFIVLE
SRKDGVKFVNSKLKSLGDRYQKILEKYKNCQKELVNTVVRTVATFSELFASLAGLLSELD
VLLSFADLASSCHTPYTRPEITFIGTYLWLSATDKGDIILEGSRHPCVEAQDCVNFIPND
CKLIRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGA
GDCQLRGVSTFMQEMLETSLILRASTHKSFIIIDELGRGTSTCDGFGLAWSICEHIVDLI
KAPTLFATHFHELTALAYEKVNDDPKRKIVGVANYHVSAIVDSSTRKLTMLHKVEPGACD
RSFGIHVAEFANFPESVIAMAREKAAELEYFSPSAINLVDANQEVGSKRKIEFELDEVAK
GAARARQFLEAFAALPLGTMDKMQAFREIRKLKDALVKDAKNCCWLQQVLQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatcttgaggaacagaacaagctccctaagctcaaattagatgctaagcaa
gcccagggctttctacattttttcaaaacgctacctcatgaccccagggcggttcgatta
tttgatcgccaggactactatactgctcatggtgagaatgcaacttttattgctaagacc
tattaccatactactactgcattaaggcaactgggtagcagatctgatgcactatccagt
gtcagtgtcagtaggaacatgtttgaaacaattgcccgagatctccttctggagagaaca
gaccatactcttgagctctatgaaggaagtggctctaactggagactcatcaaaagcgga
acacctggtaatataagcagttttgaagaaattctgtttgctaacagtgaaatgcaagat
tcccctgttgttgttgcactatcgcccaactttcaagaaaatgaatgcactgttgggttg
ggatttgttgatctaactaagagagtatttgggatggctgaatttcttgatgatcatcac
tttacaaatgtggagtcagcattgattgctcttggctgcaaggaatgtcttctgctgatg
gagagtggcaaatctaatgaaaataggatgttgtatgatgcactgaccaagtgtggtgtg
atgttaacagagagaaagaaatccaagtataaaaccagggatctggtgcatgaccttggc
aggcttgttaaaggttcaattgaaccaattcgtgatttagtttctgcatttgaatttgca
cctggtgctttgggtgcattactctcttatacagagttacttgtagatgaaagcaattat
ggaaattatactcttcaaagttacaatcttgacagctacatgaggttagattctgctgcc
atgaaggctcttaatgtcctggaaagtaaaaccgatgcaaacaaaaatttcagtttgttt
ggtctcatgaatagaacctgcactgctggaatggggaaacggttgttgcacatgtggctt
aaacaacccctattagatgtaaaagaaattaattctaggctggatgtagtgcaagcattt
gtagaggatgctgttcttcgtcaagatctgaggcaacatctgaaaagaatatcagatgtt
gagcgactggtgcgaaatctgcaaaagcaaagtgctggtctgcaacatgttgtaaaactt
tatcagtcttgtataatgctacctcacatcaaaagtgcactggaaatatatgatggacag
ttttcctcaataatgaaggagcggtttttcaaacctcttgagttgtggactgatgatgat
atgctaaacaaattcattggtctcgtagaagctgctgttgaccttgatcaactggagaat
ggggaatacatgattgcttcacgttataattccacattaactaagctgaagaaaaaacaa
gaatccctagagagttcaatacacaacttgcaccaagaaactgcaaaagatcttgatcta
cccatagataaggcattaaagttagataaaaccacacaatttggacacgtattcagaatc
acaaagaaggaagagccaaaagtaaggaataagctcagcactaagtttattgtattggag
tccaggaaagatggagtgaagtttgttaactcaaagcttaaaagcctaggggatcggtat
cagaagatacttgagaagtacaagaactgtcaaaaagagcttgtcaatactgtagttcga
actgtagcaactttctccgagttgtttgcatccttggctggattgctttctgaattggat
gtcttactaagctttgctgatttggcttctagttgtcatactccttacacaaggcctgag
atcacattcatcggtacttatttatggttatctgcgactgacaaaggagatattatctta
gagggcagtagacacccttgtgttgaggctcaagactgtgtgaattttataccaaatgat
tgcaagcttatcagaggaaaaagttggtttcaaataataacagggcctaacatgggtggg
aaatcaacatttatccgacaggtgggtgtgaatattttgatggcacaagttggttctttt
gttccttgtgacaaggccagcatatctgtccgtgattgcatctttgctcgtgttggtgct
ggtgactgccaacttcgaggagtctctacatttatgcaagaaatgcttgaaacttcatta
atattaagagcctccacacacaagtccttcataatcattgatgagttgggacgtggaaca
tcaacttgtgatggatttggtttggcctggtccatttgtgagcacattgttgatctgatc
aaggcacctactttgtttgcaacccactttcatgaactgactgctttagcctatgaaaaa
gtcaatgatgatccaaagaggaaaattgttggtgtggcaaactaccatgtttctgccatt
gttgactcatcaacccgcaaactgactatgctacacaaggttgaaccaggagcttgtgat
cgaagttttggtattcatgttgccgagtttgcaaatttcccagaaagtgtcattgctatg
gctcgagaaaaagcagcagaattggaatatttttctccgtctgcaataaacttagttgat
gctaaccaggaggtgggttctaagcggaagatagagtttgaacttgatgaagtcgctaaa
ggagcagcaagggctaggcaatttcttgaagctttcgctgctttgccattgggaactatg
gataaaatgcaagcttttcgagaaataaggaagttaaaggatgctttagtgaaggatgca
aaaaactgttgctggctgcagcaagtcttgcagtag
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