Prosopis cineraria: 129315454
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Entry
129315454 CDS
T09047
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129315454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129315454
Spliceosome [BR:
pcin03041
]
Complex A
Other components
Complex A specific factors
129315454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
RRM_10
RRM_occluded
RRM_7
KH_PNO1_2nd
RRM_5
PHD_4
DUF1866
Motif
Other DBs
NCBI-GeneID:
129315454
NCBI-ProteinID:
XP_054815108
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MDALESNPNPPPFLSSETVASDDHNPTWTEARPAERFASDFLKPYEQPANFDFRISSNTL
ASDGQNINGQPQSASGNGRDSNSEPLSIIYESARTSNTKSGTDRDHSGGEEETTSKSRRR
SRWDPQPDSNDQSGGEAGSRTKKRKSRWADDEPKPVIQLPDFMGGIEFDPEIQALNSRLL
EISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRARERLQKERQEIISQIIKK
NPAFKPPADYRPPKLQKKLYIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKG
SVKEGRMQQKRDLKPDPSENEDLHVLVEAETQESLDAAAGMVEKLLQPVDEVLNEHKRQQ
LRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKG
GTGKKMDDEYQNFLAELGGTVPESAIKQNNTLAIGSGNSGSNPPWANNSGSTGGTSQAGL
GANPVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKF
ADVQMANNAIMAMNGYRLEGRTIAVRVAGKPPQPTVHPGPPASAMPTYPVSSQPVGAYPS
QQYAAGGPLGTAPPGSYVGALVPWGPPVPPPYAPYAPPPPGSTRYPPIQGQSMPPYGVQY
PAVQTAPPGAPSQPTTSGESQQSFPPGVQSDSSTSTQSTSANMFGSSMPAMPPTAQPTYA
TSYGYPPYYGAVPPPPPAPIPTSDHMPWATNPTVPPPASTAEKTPYGADQSQSIGNVPWA
TNPPMRPPASTAEKTTYGADSEYEKFMAEMK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcgaatcgaaccctaatcctccaccattcctttcatctgaaacagtagct
tcggacgatcataaccccacatggacagaagctaggcctgcggaaagatttgcatcggat
ttcctgaagccatatgagcaacctgcgaatttcgattttcggatttcttcgaataccctg
gcttcggatggccagaacattaatggtcaaccacaatctgcttctgggaatggccgcgat
agtaattcggagcctttgagtataatttatgaaagtgccaggaccagcaataccaagagt
ggcaccgacagggatcactctggtggggaagaggaaactacaagcaaaagtcgtcgccgg
agtcggtgggatccgcaacctgattccaatgaccagagtggcggtgaagcaggtagcaga
acgaagaagagaaagtcacgttgggctgatgatgagccgaagccggtgattcagcttccc
gatttcatggggggtattgagtttgatcccgaaattcaagctttgaatagtagacttctt
gagattagtcgaatgctgcaatctggtcttcctttagacgatcgccctgaaggtgctaga
tctccttcacctgaacctatatatgataacatgggaattagaatcaacactagagaatat
cgtgctcgtgaaagattgcaaaaggagaggcaagaaatcatttctcagattatcaagaaa
aaccctgcattcaagcctcccgccgactataggccgccgaagcttcagaagaagctatat
attccaatgaaagaatttcctggttacaattttatagggcttattattggtcctcgaggc
aacacacagaagcggatggaaagagaaactggtgctaaaattgtgatccggggtaaaggg
tcagtaaaagagggtagaatgcaacagaagagggatttaaaacctgacccttcagagaat
gaagatctgcatgtccttgtggaggcagaaacacaagaatcacttgatgctgccgcaggt
atggtggagaagctcttgcagcctgtggatgaggtgttgaatgagcataaaaggcaacag
cttagggaacttgcagccttgaatggtacaattagggatgaagaatattgccggctgtgt
ggtgagcctggccatcgccaatatgcatgtcccacacgcacttctacatttaagagtgaa
gtggtatgtaagcactgtggtgatggtggtcacccaagcatagattgtccagtgaaagga
ggcactggcaagaagatggatgacgagtatcaaaacttcttggcagagctgggagggaca
gtgccagaatcagcaataaagcagaacaacacgctggcaattggttcaggcaattctgga
agcaatcctccttgggctaacaattctggatctactggtggcacatctcaagctggctta
ggggctaatccagttaaaaaggagattgatgatacaaatttgtatattgggtatttacct
cccactcttgaagatgatggtctgatccaattgtttcaacaatttggtgagattgttatg
gcaaaagtcataaaagaccggatgactgggttgagtaaaggatatgggtttgtcaagttt
gctgatgtccaaatggcgaataatgcaattatggccatgaatggctatcgcctggagggc
agaactattgcagtgagagttgctggtaagcctcctcagcctactgtgcatccgggcccg
ccagcatcagccatgcccacatatcctgtttcaagccagccagttggtgcctatccatcc
caacaatatgctgctggtggtcctcttggtactgcaccccctggaagttatgtcggtgcc
ctagttccatggggacctcccgttcctccaccatatgctccttatgctcctcccccacct
ggatcaactaggtaccctcctattcaaggtcaatctatgcctccatacggtgttcagtat
cctgcagtccagacagcccctccaggtgccccatcccagcctacgacttctggcgaatca
caacaaagttttcctccaggagtgcagtctgacagtagcacctctactcaatctacatca
gcaaatatgtttgggagttcaatgcctgctatgccaccaactgctcaacctacatatgct
acatcttatggttatccaccttactatggtgcagtgccccctccacctcccgcacctatc
ccaacttcagaccatatgccttgggctaccaatcctacagtgccgcctcctgcatcaact
gcagagaagacaccatatggtgcagatcaatctcagagcataggaaatgtgccttgggcg
acaaatcctccaatgcgaccccctgcttcaactgcagagaagacaacatatggtgcagat
tcagagtatgagaagttcatggcagagatgaaatga
DBGET
integrated database retrieval system
