Prosopis cineraria: 129315538
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Entry
129315538 CDS
T09047
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pcin
Prosopis cineraria
Pathway
pcin03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129315538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129315538
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
129315538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
129315538
NCBI-ProteinID:
XP_054815285
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MARNKESLLLLLDVGPSMHSVLPEIEKACSMLIVKKLIHSKYDEAGIVLFGTKETDNELT
AEVGGYEHVMVLKNIKVVDGDIVDALQQLPRGPASGDFLDAIIVGMDMLIKKFGDTNKGK
KRLCLITNAHCPIKDPFEGKKEDQVSTIAKQMTTYGMRMESIIVRGKHSHAVNKRIMDEN
DSLLSIFSKETDARMLYVEDSISLFGALRARNISLVTIFRGDLEVSPKLRIKVWVYKKTA
EEKFPALKKYSDKAPTTDITATHEVKVDFEYKNIEDSKNVVPPDQRIKGYSYGPQIVPIS
SAEWEAVKFKPEKGVKLLGFTDYSNIFRHHYMKDVFIFIAEPENIKATLAVSALARAMKE
MNKVAILRCVWRQGQGNLSIGVLTPNISDREDIMDSFYLNVLPFAEDVREFQFPSFSNLP
AYLQPNQQQLEATDNLVKMLDLAPDGKEEVLRPEFTPNPILERLYHHFDLKSRHPDAAVP
PLDDNLKKITVPDADLLLENKSLIDSFRTSFELKENPKRKKSRKLLQEKGSHYSEDDKTE
ITAHPVNAIEPASNVKVEKIGDITPVKDFEAMLSRRDGPDWVDKAIKGMSNKIFDLVEDS
HEGDNYAKALEYLISLRKGCVLVQEPELFNKFLRHLCNFCREKDLRSFCDYLASAGLTLI
SKAEAVDSEVTDDEARSFLVKSEREVF
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaacaaggaatcgttgcttttgctgcttgatgttggtccttcaatgcacagt
gttcttcctgagattgagaaagcctgttccatgcttattgtaaaaaaattgatacatagc
aaatatgatgaagctggaattgtcttatttggaacaaaagaaactgacaatgaattgaca
gcggaagttggtgggtatgaacatgtcatggttttaaaaaatatcaaggttgttgatgga
gatattgttgacgcattacagcaactgcctaggggacctgctagtggtgattttcttgat
gctataattgttgggatggatatgcttataaagaaatttggagacactaacaagggaaag
aaacgtctttgtcttattactaatgcacattgtccgataaaagatccatttgaaggaaaa
aaggaagatcaggtttccacaattgctaaacagatgacaacttatggcatgagaatggaa
agtattattgtgagaggaaagcatagtcatgctgtaaataagagaataatggatgagaat
gatagtttgttaagtattttttcaaaggaaacagatgccaggatgctgtatgtggaggat
tcaatctcactgtttggtgctcttagagctcgaaatatatctctcgttacaattttcaga
ggcgatcttgaagttagccctaaattgaggattaaggtatgggtgtacaagaaaacagct
gaagagaagtttccagccctgaagaaatattctgacaaggcacctacaacggatataact
gctacacatgaagtcaaggtagatttcgaatacaaaaatattgaagattctaaaaatgtt
gttccaccagatcaaagaatcaaaggttatagttacgggcctcaaatagttcctatatcc
tctgctgaatgggaagctgttaagtttaaaccagaaaagggtgttaagcttctaggattt
actgattattcaaacatattcagacatcattacatgaaagatgttttcattttcatagct
gaaccagaaaatataaaggctactctcgcagtttcagcactagcaagggccatgaaggaa
atgaataaggtagcaatattacgctgtgtttggagacaaggacaggggaatctctccatt
ggggtcttgacgcccaatatatctgacagagaagatattatggattccttttacttaaat
gtgcttccttttgctgaggatgtgcgagagtttcaattcccatctttcagtaatttacca
gcatatttgcagccaaatcaacagcagctagaggcaactgataacttagtaaagatgctt
gaccttgctccggatgggaaagaggaagttttgcgtcctgaatttacgccaaatccaatc
ctggagcgcttgtatcatcactttgatctgaaatcaaggcatccagatgctgctgtaccc
cctcttgatgacaatctcaagaaaataacagtacctgatgcagacctgttactggaaaac
aaatctctgatagattcatttcgtacgtcttttgagctcaaggaaaatcccaagcgaaaa
aaatcaagaaaattacttcaggaaaaaggatctcattatagtgaagatgataaaacagag
attactgctcatcctgtcaatgccattgaacctgcttctaatgttaaagttgagaaaatt
ggagatattactccagtcaaagattttgaagccatgttatctcgtagagatggtccagat
tgggtcgataaagcaattaagggtatgagtaataaaatatttgatctggtagaggattcc
catgaaggtgataactatgctaaagcactggaatatttaataagtcttcgcaagggctgc
gtccttgtgcaggaacctgaactgttcaacaaatttctccggcatctttgcaatttctgt
cgggagaaagatctcaggagtttctgtgactatctggcttctgcaggactcaccttgatc
tccaaagcagaagctgtagacagcgaagttactgatgatgaggctagaagcttcttggtt
aagtctgaacgagaagtcttttga
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