Prosopis cineraria: 129315552
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Entry
129315552 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129315552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129315552
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129315552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Peptidase_Prp
VMAP-M9
Motif
Other DBs
NCBI-GeneID:
129315552
NCBI-ProteinID:
XP_054815317
LinkDB
All DBs
Position
Unknown
AA seq
2081 aa
AA seq
DB search
MPLFLSDEEFFHCSNDAAAVAEKADVFIRSLLNELETVKAKADASDINAEQNCSLIEQKY
LSLTAEFSKLESHVDELQATLDQRLAELAEVQTQKEKINLQSIEKDREIERLRTEVSELH
KSKRQLIELNEQKDLQLSEKNAAITTYLDKIVNLSENAAQKEAHLSELEAELARCRAQCT
RLSQEKEIVERQNAWLNDELTTKVNSSFEIRRKYAELEAEMVSKLADVERQLSECSKSLQ
WNKDRVRELDMKLKSTHEELVSAKDAAAANEQKLYNELSTVNKLNELYKESSEEWSRKAT
ELEGVIKAMESHLKQIEDDYKEKLEKESTARKQFEKEAAELKAKLEASEAEIERSKKNGQ
NLLPQSGFNPELWLVSNEASDLVEESNMLVPKIPAGVSGTALAASLLRDGWSLGRMYAKY
QEAVDALRHEQLGRKESEAILQRVLYELEEKAEAIIDERVEHEKMVEAYSLMNQKLQNSV
TEKAILEKTIQELKADLRRHERDYNLAQKEITDLQKQVTVLLKECRDIQLRCGSVGFDAI
DDAAKGLSRTHTETDAEKVISENLLTFKDINGLVEQNAQLRSLARSLSSQIENKELEFEE
KLDLELRKHTEEASNKVTAVLQRAEEQGRMIESLHASVAMYKRLYEEEHSLHLSHSIPSE
APTADADGGRNSLKAIIESSQEAAKKSLEKAMERVRCLEDDLAQSRSENIVLRSERDKSA
LEANFARERLDSFLKEFEHQKAETNGILARNVEFSQIIVDYQQKLRESSESLNAAEEHSR
KLSMELSVLKNEKEIILNAEKRASDEVRSLSERVQCLQASLGTIQSAEEIREEARAAERR
KQEEYIQKLEREWAEAKKELQEERESARTLTRDRDQTLKNAMRQVEEMGKELAGALRASA
SAESRAAVAEAKLSSLQRKLSSIDDQHVEMDGMSGSGTMSNDEIVAELHAAKQEIEKWKE
EAQANKSHMLQYKSIAEVNEDALKQIEVVHENFKIEADSAKKALEAELGSLREKVSELEN
ESSLKSEEVASAAAGKEEALTSAMAEITNLKQEILAKSSEISAMEIQISGLKEDLDKEHQ
RWRAAQTNYERQVILQSETIQELTKTSQALAALQEEAAELHKLANAMKIENNELKVKWEE
EKAVLEKAKNDSEKKYNEINEQNKILHSRLEALHIQWAEKERNIAGISSSTSADTICDAG
LQNVISYLRRSKEIAETEISLLKQEKLRLHSQLESALKAADSAHASLEAERAKSKSLLFS
EEEFKSLQLQVRELNLLRESNMQLREENKHNFEDCQKLREIAQKARAETQNVETLLKEKE
TELEGCKHAIETIKMEKNNLDYKVSELLERCKNIDVEEYDRMKNLVRDMQDKLREKDAQA
EEMGKILVEKHDLISHLEQDLSKCRLELEDREKRINDVLQVEASLKLDLERHKKMLAQFK
KRNDSLSREKEDLGKENQQLSKQLEEIKQGKRSISDVTGEQAMKEEKDTRIQILEKHLER
LRDELKKEKEENRLEKGKRLKTEKAIKDSYSNVEQEKTKFINEIERHKEAVKRLSDEIEK
LRVITGNLPEGTNVAQLLSGSNTDELASPYISAVENFEKEAQSVFSELGGRVNQGDATLI
ADTSGSAAGPLVPIQSPGIISNAPGASSLPPKATEESKKKPVLPKANVEPRKTGRRLVRP
RLGKPEEPQGDREMSEAEGSQIASKPGSSVDTDTQSSLSQLPQSMARKRVAPTSTSELHD
ESVAPGETSSDAGALSVKKSKGSDSPQESAEGQPAATPEHPGGQPLAVESFEGGELLQGQ
NEEAVEAQNEEGEVIVEKVESKDPQNVDSAIQEESQGDKNSILEENLDQTVESKVTSDDM
QRDQGEPDNQQSAMEIESEKEEGELLPEGADVEGGNDVSNLVENQEIREGHSEPAATPEP
SQTVVDDEALEVGEINSPELSTDDKNEEGEVAEEAADGSDKSNDANDPVETDQVAEPAPA
PSTAEGTSATPAAETGSSRVIPAPKQALLALPXETEEIKQASPVSSTSTTINLSERARER
AQMRQAGVVSSIGRGRGRGAPRGRAARGGRIGGRRQPPSDA
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatttctctccgacgaggagttcttccattgctccaatgacgctgccgcggtg
gccgagaaggccgacgtattcatccgcagccttctcaacgagctcgagactgtgaaggcc
aaggctgatgcttctgacattaacgccgagcagaactgttctctcatagagcagaagtac
ctctctcttactgctgaattctcaaagctcgagtcccatgttgatgaactccaagcaacc
ctggatcaacgtctcgctgaactcgccgaagttcaaactcagaaggagaaaattaatttg
caatctattgagaaagaccgggagatagagaggttgaggacagaggtgagtgagctgcat
aaatcgaaaaggcagttaattgagttgaatgagcaaaaggatttgcagcttagcgagaag
aatgccgccatcacgacctatctcgataagattgtcaacttgtctgaaaatgctgctcag
aaggaggctcatttgagtgaactggaggcagagttggcccgatgccgtgctcaatgcact
cgtctttcacaggagaaagagattgttgagagacaaaatgcttggctgaatgatgagttg
actactaaggttaatagttcctttgagatacgcagaaaatatgctgagttggaggctgag
atggtttctaagcttgcggatgtagagaggcaattgagtgaatgctctaaatcactacaa
tggaacaaggatagagtgagggagttagacatgaaacttaaatctactcatgaggagtta
gtttcagctaaagatgctgctgcagctaatgaacagaaattgtacaatgagctctcgact
gttaataagcttaatgaactatataaagaaagttctgaggaatggtccagaaaggcaaca
gagcttgagggtgtgatcaaagcaatggagtctcatctgaagcaaattgaagatgattat
aaagagaaacttgagaaggaatctactgctcgaaaacagtttgaaaaggaggctgctgaa
ttgaaagcaaagctcgaggcaagtgaggctgaaattgaacgaagtaagaaaaatgggcag
aatcttcttccgcagagtggtttcaaccctgaactgtggttggtatcaaatgaagccagt
gacttagttgaggaaagtaacatgcttgtccctaaaattcctgctggtgtttctggaaca
gccttagctgcttcccttctgcgtgatggatggagtttggggagaatgtatgcaaaatac
caagaagctgttgatgctctgcgacatgagcaacttggcaggaaggaatctgaggcaatt
ttgcaaagggttctgtatgagttagaggagaaagcagaagccattatagatgaaagggtt
gaacatgaaaagatggttgaggcatactctttgatgaaccaaaaattgcaaaactctgtt
accgagaaggcaatcttagagaaaactatccaggaactgaaggctgacctcagaaggcat
gaacgggattataatttagctcagaaagagattactgaccttcaaaaacaggtgacagtt
ctcttgaaggaatgccgagatatacaacttcgttgtggatcagttgggtttgatgctatt
gatgatgctgcaaaaggtctttcaagaacacatacagagactgacgctgaaaaagttatc
tcagagaaccttttgaccttcaaggacataaatgggctggttgagcagaatgcacaactt
agaagccttgcaagaagtctctctagccagatagaaaataaggagttggagtttgaggag
aagcttgatctggagctcagaaaacataccgaggaagcatctaataaagtaacagctgtc
ctgcagagagcagaagagcaagggcgcatgattgaatcacttcatgcatctgttgcaatg
tacaagaggttgtatgaagaggaacatagtcttcatttgtctcattcaattccttctgaa
gctcctacagctgacgcagatggaggaagaaacagccttaaagcaattattgaaagctca
caggaagctgctaaaaagtcccttgaaaaggctatggaacgtgtaaggtgccttgaggat
gatctagcacaatctaggagtgagaatattgtactacgatctgaacgtgacaagtcggca
cttgaagcaaattttgctagggagaggcttgatagctttttaaaagaatttgaacaccag
aaagctgaaaccaatggcatattagcaagaaatgtggagttttctcaaataattgtagac
taccaacagaaattgcgtgaaagttctgagtcgctgaatgctgccgaggagcactctaga
aagctgtctatggagttgtctgttttgaagaatgaaaaggaaattatattaaatgctgaa
aaaagagcatctgatgaggttcgcagtttatctgagagggtgcagtgtcttcaggctagt
ttgggtaccatacagagtgctgaggaaatccgagaggaggcaagagctgcagagaggaga
aaacaagaagaatatatacaaaaattggagagggaatgggctgaggccaagaaagagttg
caagaagaacgggaaagtgcgcggacactcacacgagaccgtgaccagacattaaaaaat
gctatgagacaggttgaagagatgggcaaggagttagctggtgcattgcgtgccagtgca
tcagctgagtctagggctgctgttgcagaggcaaaactctccagtcttcagagaaaattg
agttccattgatgaccagcatgtcgaaatggatggaatgagtgggtctggcactatgtct
aatgatgagattgttgctgaattgcatgctgcaaaacaggagattgaaaaatggaaagag
gaagcacaggctaataaatctcacatgctgcagtataagagcattgctgaggtaaatgaa
gatgctctgaagcagattgaagttgtgcatgagaacttcaagattgaggctgacagtgca
aaaaaagccctagaggctgaacttggttccctgagagagaaggtttcagagcttgaaaat
gaatctagcttgaaatctgaagaagtggcatccgcagctgcgggaaaggaagaggctctg
acatctgcaatggctgaaatcacaaatctaaaacaagaaattttagctaaatcttcggaa
atttcagcaatggaaattcagatctctggcttaaaagaagacttagacaaggagcatcaa
agatggcgtgcagctcaaaccaattatgaaagacaggttatccttcaatctgagacaatt
caagagttgacaaaaacttcacaagcactagctgctctgcaagaggaggcagcagaatta
cataaattggccaatgctatgaaaattgaaaacaatgaactaaaggtcaagtgggaagag
gagaaggcagtgctagagaaggctaagaatgactcggagaagaagtacaatgaaatcaat
gaacagaataaaatactgcatagccgactggaagctttgcatatccaatgggctgagaaa
gaacgtaatattgctggtatttcctcaagtactagtgcagatacaatatgtgatgctggt
ctacaaaatgtgattagctatcttcgacgctcaaaagaaattgcagaaacagaaatttcc
ttattaaaacaggaaaaactgcgattacactcccagcttgagagtgctctgaaggcagca
gactctgcacatgcatcactagaagctgaacgtgctaaatcaaaatcattgttgttcagt
gaagaagagttcaaatcattgcagcttcaggttagagaacttaacttacttcgcgagagc
aacatgcagcttagggaagaaaataagcacaattttgaggactgccagaaattgcgtgaa
atagcacaaaaggcaagagctgagacacagaatgtagagactctactgaaggagaaagag
actgagttagaaggatgtaagcatgcaattgaaacaattaagatggaaaagaacaatcta
gattacaaggtttctgagctgcttgaaaggtgtaaaaatattgatgtggaagagtatgat
cgaatgaagaatcttgtgagggatatgcaggataaactaagagagaaggatgcacaggca
gaggaaatggggaaaattcttgtggaaaaacatgatttaatttcacacctggagcaggat
ctttctaagtgcaggttggagctggaagacagagaaaagaggataaatgatgttttgcaa
gttgaggcttccctaaagctggatttggaaagacacaagaaaatgctggctcaattcaag
aagaggaacgatagtttgtctagggaaaaggaggatctagggaaagaaaatcaacaactt
tctaagcagctagaagaaatcaagcaagggaagaggtcaatcagtgatgtaactggtgag
caggccatgaaagaggaaaaggacaccagaatacagattttggagaaacatctggagaga
ctgagagatgaattgaaaaaggaaaaggaagagaatcgattggagaaaggaaaacgactg
aagactgaaaaagccataaaagactcctacagcaatgttgaacaggagaaaacgaagttt
ataaatgaaattgagaggcataaggaggcagtgaaacggttatcagatgaaattgagaag
cttagggttataacagggaaccttcccgagggaaccaatgtggctcaacttctttctggg
tccaacactgacgagcttgcttctccttatatatcagctgttgaaaactttgaaaaagaa
gctcagtctgtgttttcagagcttggaggtcgtgttaatcaaggtgatgcaactttaatt
gctgatacttcgggcagtgctgcaggtcctctggtccccatccaatcccctggcattatc
tcaaacgcccctggagcaagcagtttaccacctaaagcgactgaagaaagtaagaaaaaa
cctgttttacctaaagctaatgttgaaccccgtaaaacaggaagaaggttggtcaggcct
cgtctcggaaaacctgaggagccacaaggtgaccgagaaatgtcagaggctgaaggatct
caaattgcaagcaagcctgggtcttcagttgacacagacactcaaagcagtctttctcaa
ttacctcaatcaatggctcgtaaacgtgttgctcctacctccacctccgagttacatgat
gaatcagttgcacctggcgagactagctcagatgccggtgcactctctgtgaagaaatca
aagggttcagattccccacaggaaagtgctgaaggacaacctgctgcaactccagaacat
cctggcggtcaaccactcgctgtagagtcatttgagggtggtgagttacttcaaggtcaa
aatgaagaagccgttgaagctcagaatgaagaaggcgaggttattgttgagaaagttgag
tccaaagatccgcagaatgtagatagtgcgattcaggaagaatcacaaggggacaaaaac
agcattttagaggagaatttggatcaaacggttgagtcaaaagtgacttctgatgatatg
cagagagatcagggggagccagacaaccagcaatcagcaatggaaattgagagtgagaaa
gaagagggagaattgttaccagagggtgcagatgttgagggtggtaatgatgtatctaac
cttgtggaaaaccaagaaattcgggaaggtcactccgagccagctgcaactcctgaacct
tcgcagaccgtggttgatgatgaagcgctcgaagtaggtgagatcaattctcccgagctt
tcgactgatgataagaacgaggaaggcgaggtggctgaggaggctgccgatggttctgat
aagtccaatgatgctaatgacccagttgagactgatcaggtggccgagccggcacccgca
cctagcacagctgagggcacttcagctacccctgctgcagaaactggctcctccagagtt
atacctgctcccaaacaagcactgctggcgttgcctncagaaactgaagagataaagcag
gcttcgccagtgagtagtacttcaacgaccataaatttatcagagcgagcaagggaaagg
gctcaaatgagacaagctggggtggtttcttcaataggaagaggccggggaagaggagct
ccccgaggtcgagccgccagaggtggtcgcattggcgggcgtagacaaccacctagtgat
gcttaa
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integrated database retrieval system
