KEGG   Prosopis cineraria: 129315716
Entry
129315716         CDS       T09047                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pcin  Prosopis cineraria
Pathway
pcin03030  DNA replication
pcin03410  Base excision repair
pcin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129315716
   03410 Base excision repair
    129315716
   03420 Nucleotide excision repair
    129315716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcin03032]
    129315716
   03400 DNA repair and recombination proteins [BR:pcin03400]
    129315716
Enzymes [BR:pcin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     129315716
DNA replication proteins [BR:pcin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    129315716
DNA repair and recombination proteins [BR:pcin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      129315716
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 129315716
NCBI-ProteinID: XP_054815666
LinkDB
Position
Unknown
AA seq 2207 aa
MISDSRRWDRKDSRRAKKQKLIRNTEEELEAKLGFDLFSEGEKRLGWLLNFSSSSWEDED
THKVHSCVDLYFVTQDGSMFKXKYRFQPYFYVATKDKMEMEVEAYLRRRYERQIADIEIK
EKEDLDLKNHLSGLQKSYLKLCFDTVQQLMNVKSDLMHVVERNQAKSDAAEAYESILTGR
REQKPQDFLDYIIDLREYDVPYHVRFAIDNDIRCGQWYDVCVSNTGVTLEKRTDLLQRAE
VRICAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLLINRECVGDNIEDLEYTPKPEF
EGCFKVTNVQNEVELLRLWFSHMQEVKPGIYVTYNGDFFDWPFVERRAAHHGFKMRDELG
FQCDNSQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRF
AKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYKANVICPNKHQSDREKFYNNHLLESETYIGGHVECLESGVFRSDLPTSFTLEPSAYE
QLINNLDRDLQYAIRVEGKMDLDSISNYDEVKNAIMEKLIKLRDKPICEECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLKK
QIESEFVESADRQSSKSFLDLPKPEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCAL
PGSFPENFTFKTRDTKRKLTISYPCVMLNVDVARNNTNDQYQTLTDPVRKAYTTHSECSI
EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLHGSTIEECYSAVATVANRWLDLLDNQGRDIADSELLDYISESSTMSKSLADYGEQ
KSCAVTTARRLADFLGDAMVKDKGLRCQYVVACEPKGTPVSERAVPVAIFETDAEVMKFY
VRKWCKVSADVGIRSIVDWSYYRQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKV
REKQDKFRQRKLVDVFYCMNRDELSKKQSNSGSVCHVMDGEAINDLEDFGNKTRNNISGP
RPIMRHYEANNEQHSVKPYGIEDSEQKCNDHGSEHQLPAQLEPNGLSSENVDKTADYQGW
LQTKKRKWKNIIAKRKKQRLENSKKSDCADGTLERLRNKIDHKATGRSNVDSYFKRQEVV
LTRSHWQIIQLIHSSQMGQFFAWVVVDGVMLKIPVSLPRVFYLNSRSPITEQFMGKRVNK
ALPHGRHSYNLYEVTINEVQFKETSRKLAALLADPDIEGIYETKVPLEFNAIVQLGCVCK
VDKTAKKRNLQESWNLSELHMKTTTECSYLEQSISFFYLYHSMSEGRAIYVGYFPASKAI
SVVVVNPYQNKDLSPVFLERQFRDACEALSTEAPPKNGIRFKVDYVLHVKDAETMMQRLI
NDQRNEHHGPMVAVIECPNPQLMKLAIRALDDFPCLNIPSNARDSQYQILGWQQVAAKTG
IHRCAASVQWLNERISLSRYAHVPLGNFELDWLIFTADVFFSRALRDNQQVLWISDDGLP
DLGGVNEEETCFADEVPQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEFEGGALLG
FDHEINSGPFAINDQNGIDEATSCARAFRVLKQLIQRCVADAVTSGNVYADAILQHLYRW
LCSPQSKLHDPALHQLLHKVMQKVFALLLAELRKLGASIVFANFSKIIVDTGKYDLSAAK
AYCDSLLRTLQSRDLFEWIELEPLQFWSSLLFMDQYNYGGIPAKSDEAINDEYRVDIISS
WNIAEYLPKKIQDHFVCIVSEFMYIPWKYMASSQNGDSCTPSITAGPAEKFESLVTEYIK
GQISSNFTDKLLGIVRDIMHHMKEIRLGKDQNASSGNPQLAADFHKGDAALEFIKHVCAV
LALDQSVQHDVLVMRKNLLRFVRVREFAPEAEFRDLSHSFILPNVICSYCNDCRDLDLCR
DSALLSQEWHCGVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCVRCHQVKAAHLAE
QCACAGSYMCKEDRAEFRKKMQIFYNIAARQKFQLLKECTSWILELR
NT seq 6624 nt   +upstreamnt  +downstreamnt
atgattagcgatagccgaagatgggaccgcaaagactcccgcagagccaagaagcagaag
ctaatccgcaacactgaagaagaactcgaggctaaattagggttcgatcttttctcagag
ggcgaaaaacgacttggatggttgctgaatttttcttcctcatcttgggaggatgaagat
acacacaaagtccatagttgtgtagatctttattttgtgacgcaggatggttctatgttc
aagntcaagtacagatttcaaccttatttctacgtggctacaaaggataaaatggagatg
gaagttgaagcatatctgagacggcgttatgaacgtcagattgcagatattgaaattaaa
gagaaggaagaccttgatcttaaaaatcatttgtctggattgcaaaaatcatatttaaag
ctatgctttgacactgttcaacaattgatgaatgtgaagagtgatctgatgcatgttgtt
gaaagaaatcaggcaaaatctgatgcagcagaagcttacgaatccatattaactggaaga
agggagcaaaaacctcaagattttctagattatataatcgatcttcgtgaatatgatgtt
ccttatcatgttcgctttgccattgataatgacattcgatgtggccaatggtatgatgtt
tgtgtgtccaatactggggttacacttgagaagaggacagatcttctgcagcgtgctgaa
gttcgtatttgtgcttttgatatagagaccacaaaacttccattgaagttccctgatgct
gaatatgacttaattatgatgatttcatacatggtagatgggcaagggtatttgctcata
aatagagagtgtgttggggacaacatagaggatttggaatacactccaaaaccagagttc
gaaggatgttttaaggtgacaaatgttcaaaatgaggttgaacttcttagattgtggttt
tctcatatgcaagaggtgaaacctggtatatatgttacatacaacggtgatttctttgat
tggccatttgtggaaagaagggcagctcatcatgggttcaaaatgcgtgatgagttgggt
tttcaatgtgacaatagtcaaggggaatgtcgagctaaatttgcctgccatctagattgt
tttgcttgggttaaacgtgacagttatcttcctcaggggagccaaggcctaaaggctgtt
acaaaagcaaagttgggttatgatcccctagaggtgaaccctgaggacatggttcgcttt
gcaaaggaaaaacctcagatgatggcctcttattccgtttctgatgctgtggcaacttat
tacttgtatacaacctatgttcatccctttattttttctcttgcaacaattatacccatg
tcaccagatgaggttttgcgtaaaggtagtgggaccctctgtgaaatgttgctcatggtt
caggcatacaaggctaatgtgatctgccctaacaaacaccagtctgatcgagagaaattt
tacaacaatcaccttcttgagagtgagacatacattggtggccatgtggaatgccttgaa
agtggtgtatttagatctgatcttccaactagttttacacttgaaccttcagcatatgag
caattgatcaacaaccttgatcgagacctgcaatatgctataagagtagagggtaagatg
gacttggattccatctctaattatgatgaagttaagaatgctatcatggaaaagcttata
aaattgcgagacaagccaatatgtgaagaatgccccctcatttatcatttggatgtagct
gctatgtatccaaacatcatcttaacaaaccggcttcagccaccttcaatagttacagat
gaggtctgcactgcatgtgatttcaaccgtcctggaaagacttgccttcgaaaacttgag
tgggtttggcgtggagaaattttcatggcaaagaaaagtgattattatcatttaaagaag
cagattgagtctgagtttgttgaaagtgctgataggcagtcatctaaatcatttcttgac
ttgcccaagccagagcagcaatctaggcttaaagaacgtctaaagaaatactgccagaag
gcatataaacgggtacttgataagccagtaactgaacttcgcgaagcggggatctgcatg
cgtgaaaatccattttatgttgacactgttcgcagttttcgggatagaagatatgaatac
aaaggtcttaataaggtttggaagggaaagttgtcagaagccaaggccagtggaaattct
attaagatccaagaggcacaagacatggttgtgctttatgattcattgcaacttgcacac
aagtgcatactgaattccttttatggatatgtcatgcgcaagggagcaagatggtattcc
atggaaatggctggggttgttacatatactggtgcaaaaatcattcagaatgctcgcttg
cttgtagagaaaataggaaagccacttgaattagacacggatggtatttggtgtgcactt
cccggctcttttccagaaaatttcacttttaaaacaagagacacaaagaggaaattgact
atttcatacccttgtgtcatgcttaatgttgatgtggcaaggaataacacaaatgatcag
taccagacgctcactgatccagttaggaaagcttataccactcacagcgaatgctctatt
gaatttgaagttgatggaccatacaaggcaatgatccttccagcttccaaagaagaagga
attctaattaagaagcgttatgctgtttttaatgatgatggaactctagcagagttgaaa
ggttttgagatcaagcggagaggtgaactgaagctaataaaagttttccaggcagaactt
tttgacaagtttcttcatgggtcaaccatagaggaatgctattcagctgttgctactgtg
gcaaaccggtggcttgatcttcttgataaccaaggaagggatattgcagatagtgagtta
cttgattatatatcagaatcaagtaccatgagcaagtctttagctgattatggtgagcag
aagtcttgtgctgttaccactgctagacggcttgctgactttcttggtgatgccatggtc
aaagataaaggtctccgatgtcagtacgtagtagcatgtgaacctaagggaacacctgta
agtgagcgtgctgttcctgtggcaatatttgaaactgatgctgaagtaatgaagttctat
gtccgaaaatggtgcaaggtctcagctgatgttggcattcgatccatagttgattggtcc
tattataggcaacggctgagctctgcaattcaaaaaattatcaccattcctgcggcaatg
cagaaggttgcaaatcctgtcccaagggtggttcatcctgattggttgcataagaaggtt
cgggagaagcaggacaaatttcgccaacgaaaattggttgatgtcttttattgtatgaac
agggatgaactctctaaaaagcaaagtaattctggtagtgtctgccatgttatggatgga
gaagctattaatgacttggaggattttggtaacaagaccaggaataatattagcggacct
agaccaattatgcggcattatgaagctaataatgaacagcactcggtgaagccttatggc
atagaagattctgagcaaaaatgtaatgatcatggtagtgagcatcagctaccagcacag
ttagaacccaatggattgtcatctgaaaatgttgacaaaacagcagattatcaaggatgg
ctccagacgaagaagagaaagtggaaaaatataatagctaaaagaaagaagcaaagattg
gagaattcaaagaaatcagactgtgctgatggcactcttgaaagactgagaaataagata
gatcataaagctacaggaagaagtaatgttgattcatatttcaaaaggcaggaggtagta
ctgacgcgttcccattggcagataatacagctaattcacagttcacagatgggtcaattt
tttgcttgggttgttgtcgatggggttatgctaaagattccagtttcacttcctagggtc
ttttacctcaattctaggtcaccaattactgagcagtttatgggtaaacgtgtcaataag
gctcttccacatggaaggcatagctataacctgtatgaggttacaattaatgaagttcaa
tttaaagaaacgagcagaaagcttgcagctcttctggcagatcctgacattgagggaata
tatgaaacaaaagtgccactagagtttaatgccatagtccagcttggctgtgtatgcaag
gtggacaaaactgctaaaaagcgtaatcttcaggaatcatggaatctgagtgaattgcac
atgaagaccactacagaatgctcttatcttgaacaatccatatccttcttttacttgtat
catagcatgtctgaggggcgggctatatacgttggatattttcctgcatcaaaagcaata
tctgttgtggtagttaatccgtaccaaaacaaagacttatctccggtatttcttgaaaga
caattccgtgatgcttgtgaagctttgtctactgaggcgcctcccaaaaatggtatcaga
tttaaggtggactatgttttgcatgtcaaggatgctgaaacgatgatgcaaagattgata
aatgatcaaaggaatgagcatcatgggcctatggttgctgtcattgaatgtccaaatccc
cagctaatgaaattggctatccgagctctagatgattttccatgcctgaacatcccttct
aatgcacgtgatagtcagtaccagattcttggatggcaacaagttgctgcaaaaactgga
atacatcgctgcgctgcttcagtccagtggctcaatgagagaatttctctctcaagatat
gctcatgtaccgttagggaattttgaacttgactggctcatatttacagcagacgtcttc
ttttccagagcattgagggataatcaacaggtactttggatatccgatgatgggcttcct
gatttaggcggagttaatgaagaagagacatgttttgctgatgaggtcccccaacctgtt
cttacctaccctggagcttacagaaaagttacagtagagctaaagattcaccacctggcc
gtagatgctcttctgaaaagcaaccaagtcaatgagtttgaaggaggtgctttgttagga
tttgatcatgaaataaactctggaccgtttgccataaatgatcagaatggcattgatgag
gctacctcatgtgcacgtgcttttcgagtcttaaagcagttaatccaacggtgcgttgca
gatgcagttacatctggaaatgtatatgctgatgcaatactacagcatctatatcgatgg
ctatgcagtcctcaatcaaaacttcacgacccagctcttcaccaattactccacaaggtc
atgcagaaggtttttgcattgctgttggcggagctccgtaaattgggtgcatcaattgtt
tttgcaaacttttcaaaaataattgtagacacgggaaaatatgatctgtctgcagccaaa
gcttactgtgatagcttgttacgaactctacaatctagagatttatttgagtggattgaa
cttgaaccacttcagttctggagctcattgctattcatggatcagtataactatggtgga
attccagcaaaatctgatgaggctataaatgacgaatatcgagttgacattatatcgagt
tggaacattgccgaatacttaccaaagaaaatccaggaccattttgtttgcattgtttct
gaattcatgtacattccctggaagtatatggcttcatcacaaaatggcgactcctgcacc
ccatcaatcactgctgggcctgcagagaaattcgaatcacttgtgacagaatatattaaa
gggcagatcagctctaacttcacagacaaacttctgggaattgttcgcgatattatgcat
catatgaaggagataagactaggaaaagaccagaatgcatcgtctggcaaccctcaactt
gcagctgatttccacaaaggggatgcagccttggaatttatcaagcatgtctgtgccgtc
ctggccctggaccagagcgtgcagcatgatgttctggtcatgagaaagaatttgttgaga
tttgttcgtgtcagggagttcgcaccagaagctgagtttcgtgatctgagtcattcgttc
atattacccaatgtcatctgcagctattgcaatgattgcagagacttggatttgtgccgt
gactcagctttactgagtcaggagtggcattgcggcgtgccgcagtgtgggcagccatac
gatcgtgaagtgatggaaaatgcacttctccagattgtacggcagagagaacgactatac
cacttgcaagatctggtgtgtgttagatgtcaccaggtgaaagctgctcatttagctgag
cagtgtgcttgcgcagggtcatacatgtgcaaggaagatagagctgaattccgtaaaaag
atgcaaattttctacaacatcgctgctcgccaaaaattccaactccttaaagaatgcacc
tcatggattctagaattgagatag

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