KEGG   Prosopis cineraria: 129316038
Entry
129316038         CDS       T09047                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
pcin  Prosopis cineraria
Pathway
pcin03018  RNA degradation
pcin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129316038
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129316038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcin03019]
    129316038
   03041 Spliceosome [BR:pcin03041]
    129316038
Messenger RNA biogenesis [BR:pcin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129316038
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     129316038
Spliceosome [BR:pcin03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    129316038
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 129316038
NCBI-ProteinID: XP_054816252
LinkDB
Position
Unknown
AA seq 98 aa
MSTGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDARLDLSKLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcgactggacctggtcttgagtctcttgtagatcagacgatttcagtcatcacgaat
gatggaagaaatatagtgggagtcctcaagggttttgaccaggcaacaaatatcattctt
gatgaatctcatgagcgagttttttctaccaaggaaggtgtccagcaacttgttctaggt
ttgtacattattaggggtgacaacattagtgttgtaggtgaactggatgaagatctggat
gcgaggctggacctgtcaaagcttagagctcatccattaaagcctgttattcactga

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