Prosopis cineraria: 129316038
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Entry
129316038 CDS
T09047
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129316038
09123 Folding, sorting and degradation
03018 RNA degradation
129316038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129316038
03041 Spliceosome [BR:
pcin03041
]
129316038
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129316038
mRNA degradation factors
5'-3' decay
Lsm complex
129316038
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129316038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
129316038
NCBI-ProteinID:
XP_054816252
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MSTGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDARLDLSKLRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactggacctggtcttgagtctcttgtagatcagacgatttcagtcatcacgaat
gatggaagaaatatagtgggagtcctcaagggttttgaccaggcaacaaatatcattctt
gatgaatctcatgagcgagttttttctaccaaggaaggtgtccagcaacttgttctaggt
ttgtacattattaggggtgacaacattagtgttgtaggtgaactggatgaagatctggat
gcgaggctggacctgtcaaagcttagagctcatccattaaagcctgttattcactga
DBGET
integrated database retrieval system