Prosopis cineraria: 129316372
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Entry
129316372 CDS
T09047
Name
(RefSeq) uncharacterized protein LOC129316372 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pcin
Prosopis cineraria
Pathway
pcin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129316372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129316372
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129316372
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129316372
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129316372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
129316372
NCBI-ProteinID:
XP_054816736
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MLDNTSSISQSGFMNNVNQQQLPLPNSNLGIQTRHPLGAGILQNMNPFMTNMQPMINPLP
FMHAADNFHPLQNNQLVPPHFTLVGQQNGVGNVNCNPLFPVQGPNMVNGGQFNLSQVQGH
ILAQNITSLLQQNNMNLQNGQFCAPLPLQNMNQQLPMQIPNSAQVIPYGMFPGSHSMCSF
PNQVPQAMVPQNPFSSANMQLNSVPGNQVPQAMVPQNPFSSASLPGNQVPQAMVPQNPFS
SASLPLNHVPGNQVRPQGNQNEKNMFSPFSSQQLEGNTRATPNPNNLKQLHAKHSQPAFT
SSQANHKNNVKANGPNPNWKGSPSKNLNGPNRGRIQGRFQKSKFHDINEGKKKFGAPKEH
WHKGFNNEKAGNSGANYKKQNKELKRSLSMIYTDQEIQQWREARRKNYPTKDSIQKKQGE
QQNDLKVIDREVFRRELKEILAKQAELGVEVADIPAYYLKDSSTQGLNRGERGNSTNKRK
FNNKFDKRTDRKHRHSKKQKCADKDLGKGPSLEKRSPTLLQKLLSADIKRDKSHLFQAFR
FMVMNSYFKDWPHKPLRYPSVTVKENGSEDGDEGLVNVMNGNNGDVFEDGDCDDNENDSI
QQVTPQEDCHDGETEESEEEGEIVD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataatacaagttccataagtcaatccggtttcatgaataatgttaaccagcaa
cagcttcccttgccaaacagtaatctcggcatacaaacccgccatccattgggtgcaggg
atcctccaaaacatgaatccctttatgaccaatatgcaaccaatgatcaatccacttcct
ttcatgcatgctgctgataattttcatccattgcaaaacaatcagctggttccgcctcat
tttactttggttggtcagcagaatggtgttggcaatgtgaattgcaatccactgtttcct
gttcagggaccaaacatggtgaatggaggtcaatttaatttgtcccaggtccaggggcat
attttagcgcagaatattacaagtttgctacagcagaataatatgaatttgcaaaatgga
caattttgtgctccgttgcccctgcaaaatatgaatcaacagttacctatgcagatcccc
aactcagctcaagttattccatatggtatgtttccaggttcccattctatgtgcagcttt
ccaaaccaagtgcctcaggctatggttcctcaaaatccattttcttccgcaaatatgcag
ttaaatagtgtgcctggaaaccaagtgcctcaggctatggttcctcaaaatccattttct
tctgcaagtctgcctggaaaccaagtgcctcaggctatggttcctcaaaatccattttct
tctgcaagtctgccattaaatcatgtgcctggaaaccaggttagaccacagggtaaccag
aatgagaaaaacatgttctcacctttttcatctcagcagttagagggtaacactcgggca
acacctaatcctaataatttgaagcaactacatgcaaaacactcccaacctgcattcaca
agttctcaggcaaatcataagaacaatgtcaaagctaatggtccaaaccctaattggaaa
ggttcaccaagcaaaaacttaaatggtccaaatcgagggaggattcaaggaagatttcaa
aagtctaagtttcatgatatcaacgaaggaaagaagaaatttggggctccaaaagaacat
tggcacaaagggttcaacaatgagaaggcaggaaattctggtgctaactataagaaacag
aacaaggaactaaaaagatctttgtcaatgatatacactgaccaagaaatccaacagtgg
cgtgaagcaaggaggaagaactaccctaccaaagacagcattcaaaagaagcagggggag
caacagaatgacttgaaggtcattgatagggaggtttttcgaagagagctcaaggagatt
ttagcaaagcaagctgagttaggggttgaagttgctgacataccagcttactatttgaag
gattcttcaacacaaggtcttaaccgtggagagagagggaattccactaacaaaaggaaa
ttcaataacaagtttgacaaaagaactgacaggaaacataggcattccaagaagcagaag
tgtgcagacaaagatttgggaaagggcccttctttggaaaagagaagtccaactttgttg
caaaaactcttgagtgcagatataaagagggataagagccatttatttcaggcttttagg
ttcatggtgatgaattcctatttcaaagattggcctcataagccgctaagatatccatct
gttacggtcaaagaaaatggttctgaagatggcgatgaaggccttgtaaacgtgatgaat
ggcaacaatggtgatgtttttgaagatggagattgtgatgataatgaaaatgactctata
cagcaagtcactccgcaagaggactgtcatgatggagaaactgaagaatctgaagaggaa
ggtgaaattgtggattaa
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