Prosopis cineraria: 129316392
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Entry
129316392 CDS
T09047
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
pcin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129316392
03015 mRNA surveillance pathway
129316392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129316392
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129316392
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_3
RRM_ACIN1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129316392
NCBI-ProteinID:
XP_054816771
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MAKPGRGRRSPPSGSVSGSSSRSRSSSPSDSRSSSRSRSPSRSRSFSSSSSPSRSVSSRS
RSPPPPRRKSPAEAVRRGRSPPPQSKRISPPPRKPSPVRESLVLHIDKLSRNVHEGHLKE
IFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRGDAEKALLYMDGAQIDGNIVKARFTLP
PRQKVSPPPKASAVAPKRDAPRTDNANADTEKDGPKRQRESSPRRRPPSPRRRSPVPRRV
GSPRRPESPVRRRMDSPYRRGDTPPRRRPVSPARGRSPSPPRRLRSPASRVSPRRMRGSP
IRRRSPPPPRRRSPPRRVRSPRRSPINRRRSRSPPRRSARSWSRSFSPPRRGRPPMRRGR
SSSSFSDSPSPRKVSRRSRSRSPRRPLRGRGSSKSSSSSSPPPARRP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacctgggcgaggtcgtcgctcaccgccgtcaggttccgtttctggctcctca
tcgcgctctaggtcttcctctccctccgattctcgctccagctcccgttcccgctctccc
tctcgctccagatccttctcctcgtcctcttctccgtcccgcagtgtcagttctcgaagc
cgaagtccccctcctccaagaaggaagagtcctgctgaagctgttaggagaggtagatct
cctcctcctcaatctaaaaggatatctccaccccccaggaaaccttctcctgttcgtgaa
tcacttgttctccacatagacaaactcagcaggaatgtccatgaaggccatttgaaagaa
atatttagtaacttcggtgaggttgtaaatgtggagttggcaatggatcgaactgttaac
cttcctaaaggatatggatatgtggaattcaagacaagaggggatgctgaaaaggcctta
ctatacatggatggtgcccagatagatggtaatattgttaaggccagatttaccttgcca
ccaagacagaaggtttcaccacccccaaaggcttctgctgttgctccaaagagagatgct
ccaagaactgataacgctaatgcagacactgaaaaagatgggccaaagcggcaaagagaa
tcttctcctaggagaagacctccttcaccacgaaggagatctcctgtgcctcgaagagtt
ggatcaccaagacgaccagaatctcctgttcgtcgtcgaatggactcaccctatcgtcgc
ggagacacacctcctaggaggaggcctgtgtctcctgcaagaggcagatctccatctcca
ccaaggcgccttagatcccctgcaagtagggtctcacccagaaggatgcgtggaagtcca
attcgtaggcgttctcctcctcctccaaggcgccgttcaccgcctagaagagttcgtagt
cctagaaggtctccaatcaatcgcagacgcagtcgctctccaccacgaaggtctgcacgc
tcgtggtcaagatcattctcaccaccgcggagaggtcggccacctatgagacgtggaagg
tcatcgtcatccttctctgattcaccaagtccccgcaaggtatcccggagatcaaggagt
cgcagtccaagaaggccattgcgaggaagaggtagtagcaagagcagcagcagcagctca
ccacccccagcccgcaggccatag
DBGET
integrated database retrieval system
