Prosopis cineraria: 129317031
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Entry
129317031 CDS
T09047
Name
(RefSeq) zinc finger CCCH domain-containing protein 4-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129317031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129317031
Spliceosome [BR:
pcin03041
]
Complex B
Other components
Prp19-related factors
129317031
Complex C
129317031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
zf-CCCH_3
zf-CCCH_4
zf-CCCH_10
zf-CCCH
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129317031
NCBI-ProteinID:
XP_054817315
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MAHRLLRDHEADGWERSDFPIICESCLGDNPYVRMTRAEYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSISSHDAIPKSDVNREYFAE
EHDRKTRAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGAECPYR
HEMPVTGELSQQNIKDRYYGVNDPVALKLLGKAGEMTSLEPPEDETIKTLYVGGLDARVS
EQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQTSKPDSEGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGVHYYNIPPPPQQDRSYYP
SMDPQRMGAVIPSQDAGPPGGAAGTGENNKPSMEKQQMQHFAHPMMPPPPGQYHHHQYYP
PPAYGYMPPVPSYQQYPPPPYNPGMATSQPPPAVNQPYQQAMQPGSSAPSGSAPAALAPA
EAGTSTSASQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgcataggttgcttagagaccatgaggcagatggttgggaacgatctgatttccct
attatctgcgaatcatgtctgggtgacaacccatatgttcgtatgacaagagctgagtat
gataaggagtgtaagatttgtacacggccatttactgtttttagatggagacctggtcga
gatgcaagatataagaaaactgagatctgccaaacatgtagtaaactgaaaaacgtttgt
caagtctgccttctggatcttgaatatggattaccagttcaagtccgagacactgctctc
agcattagctcccatgatgctattccaaagagtgatgttaatcgggagtattttgctgaa
gaacatgatcgcaagactcgagctggcttggattatgaatcctcatatggaaaagtacgc
ccaaatgatactattttgaagcttcaaaggacaacaccatactacaaaagaaaccgggct
catgtttgcagtttctacataaggggtgagtgtaccagaggagctgaatgcccttatagg
catgagatgccagtgactggggagttgtcacaacaaaatatcaaagatcgttattatggg
gtgaatgatcctgtggcgttgaagttacttggcaaggcaggagagatgacctctctggag
cctccagaggatgagaccattaaaactctctatgttggtgggcttgatgctagggttagt
gagcaggatctgcgtgatcacttttacgcccacggtgaaatagaatccatcaagatggtg
ctccaacgggcttgcgcttttgtaacctacacaaccagagaaggtgcagaaaaagcagca
gaagagctctccaacaagctagttatcaagggcctaaggttgaagctgatgtggggcaga
cctcagacatctaaacctgactctgaaggttccgatcaagcgaggcagcaggcatctgtg
gctcatagcgggttgttgcctcgagccgtcatatcacagcagcagaaccaggatcaaacc
cagggagtgcattactataacattccacctcctcctcagcaagatagaagctactatcca
tcaatggatcctcaaagaatgggtgctgttattccatcccaagatgctggtcctcctggt
ggggccgctgggacaggagagaacaacaaacccagtatggagaagcagcaaatgcagcat
tttgcccatccaatgatgcctccaccacctgggcaatatcaccatcatcagtattatccc
cctccggcgtacggttatatgccacctgtaccttcttatcaacagtacccgccaccacca
tacaaccctgggatggctacatctcagccaccaccagcggtaaatcagccgtatcagcaa
gctatgcagccaggatcatctgctccctcagggtctgcaccggctgcactggcaccggca
gaagcaggaacgtcaacctcggcctcacagtag
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integrated database retrieval system
