KEGG   Prosopis cineraria: 129317342
Entry
129317342         CDS       T09047                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
pcin  Prosopis cineraria
Pathway
pcin03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129317342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcin03019]
    129317342
   03036 Chromosome and associated proteins [BR:pcin03036]
    129317342
Messenger RNA biogenesis [BR:pcin03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     129317342
Chromosome and associated proteins [BR:pcin03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     129317342
    COMPASS/SET1 complex (yeast)
     129317342
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_TEP1_C WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 NBCH_WD40 WD_LRWD1 PQQ Methyltransf_13
Other DBs
NCBI-GeneID: 129317342
NCBI-ProteinID: XP_054817662
LinkDB
Position
Unknown
AA seq 339 aa
MTSLTELDDDMVRSMSIGAVFSDFVGKINSIDFHRKDDLLVTASEDDSVRLYDIANAKLL
KTTYHKKHGTDRICFTHHPSSVICSSKYNLESTGESLRYLSMYDNRCLRYFKGHKDRVVS
LCMSPINDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPAVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYAGEKRCGFS
LDPSPGTKIEATFTPDGKYMLAGSGGGTIHAWSIDMKNEVACWSSHIGVASCLKWAPRRA
MFAAASSVLTFWIPDDSKLKAEHGGQDSEAGAQTQPHGH
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgacatcgctaacggagcttgacgatgatatggtgcgcagcatgtcaataggcgcagtc
ttctccgacttcgtcgggaagataaattccattgattttcatcgtaaggatgatttacta
gttacagctagtgaagatgactcagtgcggctctatgacattgcaaatgctaagctgctg
aagaccacttatcataagaaacacggtactgatcgaatttgctttactcatcacccaagc
tctgttatatgttcttcaaagtacaatttggagtctactggggaatcgttgaggtattta
tcaatgtatgataaccgatgcctgcggtacttcaaaggccataaagacagagttgtttca
ctttgcatgtctccaatcaatgatagcttcatgtctggttctctagaccacagtgtcaga
atatgggatctccgagtaaatgcctgccagggaatattacgtttacgtggtagacctgct
gttgcatacgaccagcaaggcctggtttttgctgtggcaatggaaggaggggctatcaaa
ttgtttgattcacgttcctatgacaagggtccttttgacacctttctagtcggtggtgat
acagcagaggtttgtgatatcaaatttagcaatgatggcaaatcaatgcttctgactaca
acaaacaacaatatttacgttcttgatgcatatgcaggagagaagcggtgcgggtttagc
ctagatccatctccaggtacaaaaatagaggctacatttacaccagatggaaagtatatg
ttggcaggctcaggaggcggaactattcatgcgtggagtattgacatgaaaaatgaggtg
gcatgttggagcagccatattggcgtggcttcatgcttgaagtgggcccctcgccgtgcc
atgttcgctgcagcctcttccgttctcacgttctggattcccgacgactctaagctgaaa
gctgagcacggtggtcaggactccgaagctggagctcaaacccagccacatggtcactaa

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