KEGG   Prosopis cineraria: 129317674
Entry
129317674         CDS       T09047                                 
Name
(RefSeq) replication factor C subunit 2-like isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
pcin  Prosopis cineraria
Pathway
pcin03030  DNA replication
pcin03410  Base excision repair
pcin03420  Nucleotide excision repair
pcin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129317674
   03410 Base excision repair
    129317674
   03420 Nucleotide excision repair
    129317674
   03430 Mismatch repair
    129317674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcin03032]
    129317674
   03036 Chromosome and associated proteins [BR:pcin03036]
    129317674
   03400 DNA repair and recombination proteins [BR:pcin03400]
    129317674
DNA replication proteins [BR:pcin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    129317674
  DNA Replication Termination Factors
   ELG1-RFC complex
    129317674
Chromosome and associated proteins [BR:pcin03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    129317674
DNA repair and recombination proteins [BR:pcin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     129317674
  Check point factors
   HRAD17(Rad24)-RFC complex
    129317674
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N AAA_16 AAA_24 Mg_chelatase AAA_14 AAA_11 SLFN-g3_helicase AAA_2 AAA_5 DEAD nSTAND3 ResIII AAA_30 PhoH AAA_assoc_2 AAA_28 AAA_19 RNA_helicase AAA_25 AAA_7 AAA_18 NPHP3_N TIP49 ATPase_2 Parvo_NS1 DUF3853 AAA_23 IstB_IS21 DUF815
Other DBs
NCBI-GeneID: 129317674
NCBI-ProteinID: XP_054818003
LinkDB
Position
Unknown
AA seq 342 aa
MAPIVQSSQPWVEKYRPKQVKDVAHQHEVVRVLTSTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVSTNQRKSGYRCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS
SRILYICKEEGLYLDSGALSTFSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVI
ATEVVQAFLATCKSCNFDLANKEVNDFIAEGYPVSQLLIQLFEAIVEADDISDEQKARIS
KKLGEADKCLVDGADEYLQLLDVASNTIRACCNMPEGFSFEG
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggcgccaatcgttcagagctcccaaccatgggtggagaaatatcggccaaagcaagtt
aaagatgtagcccaccagcatgaagtggttcgagtactcacaagcactctcgaaactgga
agttgcccgcacatgctcttctatggtccacccggcactggaaagaccacaactgcactt
gcgattgcccatcagcttttcggacctgagctttacaagtctagggtgctggaactgaat
gcaagtgatgatcgtgggattaatgttgtgcggacaaagataaaggattttgctgccgtg
gctgttagtaccaatcagcgtaagagtggttatcgatgcccgccatataagattattatt
ctagatgaggcagattcaatgaccgaagatgctcagaatgctctgcgtcgtacaatggag
acttactctaaggttacaaggttcttttttatatgcaattacattagcaggattatagaa
ccactcgcttcaaggtgtgcaaaattcagatttaagccactgtcagaagaaatcatgagc
agtcgaatactgtacatttgcaaagaagaagggctttatcttgattctggggctctttca
acctttagttccatttctcaaggagatctccgtagggctattacatacttgcagtcagct
gcccgcttatttggatcttcaatttcttcaaaggacctgatttctgtctctggggtcatt
gcaacagaggttgtgcaggcttttcttgcaacctgtaaaagttgtaattttgatttagca
aacaaggaagttaatgatttcattgctgaaggatatccagtctctcagttactgattcag
ttatttgaggccattgttgaagcagatgatatatcagatgaacagaaggcaagaatatcc
aagaaattgggtgaagctgataagtgccttgttgatggtgctgatgaatatttgcagctt
cttgatgtggccagcaatacaattcgagcttgttgtaacatgccagagggattttctttc
gagggctag

DBGET integrated database retrieval system